RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 PSMD2Q13200 908 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 CTTNQ14247 550 aaKnown RBP11.55□□□□□ -0.56
TOP3A-209ENST00000580095 ABCB5Q2M3G0 1257 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 ASTE1Q2TB18 679 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-209ENST00000580095 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 PPP1R18Q6NYC8 613 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 TRIM59Q8IWR1 403 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 ETNPPLQ8TBG4 499 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 RUSC1Q9BVN2 902 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 TSGA10Q9BZW7 698 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 NT5C3AQ9H0P0 336 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 EFCC1Q9HA90 598 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 MYH7BA7E2Y1 1941 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 ANO9A1A5B4 782 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 SPDYE3A6NKU9 549 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 TCP10L2B9ZVM9 353 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 ANKRD65E5RJM6 399 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 OPLAHO14841 1288 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 SYF2O95926 243 aaKnown RBP11.54□□□□□ -0.56
TOP3A-209ENST00000580095 GCFC2P16383 781 aaKnown RBP11.54□□□□□ -0.56
TOP3A-209ENST00000580095 ZNF76P36508 570 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 KIAA0753Q2KHM9 967 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 KLHDC7AQ5VTJ3 777 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 CCDC174Q6PII3 467 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 CCNI2Q6ZMN8 369 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-209ENST00000580095 SND1Q7KZF4 910 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOP3A-209ENST00000580095 FBXO11Q86XK2 927 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 LENG9Q96B70 501 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 ZDHHC15Q96MV8 337 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 LY75O60449 1722 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 CFBP00751 764 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 KLHL30Q0D2K2 578 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 GIT2Q14161 759 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 TRADDQ15628 312 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 SLC9C1Q4G0N8 1177 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 DNAJC21Q5F1R6 531 aaKnown RBP11.54□□□□□ -0.56
TOP3A-209ENST00000580095 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 ACER1Q8TDN7 264 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 PRMT6Q96LA8 375 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-209ENST00000580095 ALS2CR12Q96Q35 445 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 AMNQ9BXJ7 453 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 LRRC27Q9C0I9 530 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 PCDHB13Q9Y5F0 798 aa11.54□□□□□ -0.56
TOP3A-209ENST00000580095 MSH4O15457 936 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 ZC2HC1CQ53FD0 456 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-209ENST00000580095 DACT2Q5SW24 774 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 ZNF662Q6ZS27 426 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 NOX5Q96PH1 765 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 PKD2L1Q9P0L9 805 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 CEP72Q9P209 647 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 AJAP1Q9UKB5 411 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-209ENST00000580095 HDAC9Q9UKV0 1011 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 DNM3Q9UQ16 869 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 SUGT1Q9Y2Z0 365 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 KDM3AQ9Y4C1 1321 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 AKAP3O75969 853 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 GCNT3O95395 438 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 PLS1Q14651 629 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 TTC19Q6DKK2 380 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-209ENST00000580095 TPH2Q8IWU9 490 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 TXLNBQ8N3L3 684 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 EXOC4Q96A65 974 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 CSRNP1Q96S65 589 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 TSPYL1Q9H0U9 437 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 LCMT1Q9UIC8 334 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 CETN3O15182 167 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 USP11P51784 963 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 PTK2Q05397 1052 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 MAEAQ7L5Y9 396 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 MASTLQ96GX5 879 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 HYOU1Q9Y4L1 999 aa11.53□□□□□ -0.56
TOP3A-209ENST00000580095 ZC3H4Q9UPT8 1303 aaKnown RBP11.52□□□□□ -0.56
TOP3A-209ENST00000580095 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 PCNTO95613 3336 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 UBR3Q6ZT12 1888 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 NMT1P30419 496 aaKnown RBP11.52□□□□□ -0.57
TOP3A-209ENST00000580095 TUBB4BP68371 445 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 COG2Q14746 738 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 HYIQ5T013 277 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 BANK1Q8NDB2 785 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 IFT81Q8WYA0 676 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.52□□□□□ -0.576e-9■■■■■ 134.6
TOP3A-209ENST00000580095 CALCOCO1Q9P1Z2 691 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 NYAP2Q9P242 653 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 BRWD3Q6RI45 1802 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 AGPSO00116 658 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 LCA5LO95447 670 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 APBA3O96018 575 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 SERPING1P05155 500 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 TBC1D10BQ4KMP7 808 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-209ENST00000580095 HAUS3Q68CZ6 603 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 PODNQ7Z5L7 613 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 SPAG5Q96R06 1193 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 SH2D3AQ9BRG2 576 aa11.52□□□□□ -0.57
TOP3A-209ENST00000580095 ARMCX3Q9UH62 379 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms