RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 ODF2LQ9ULJ1 636 aa9.13□□□□□ -0.95
SKA2-203ENST00000578105 SIK3Q9Y2K2 1263 aa9.13□□□□□ -0.95
SKA2-203ENST00000578105 IGLV3-22A0A075B6J6 115 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 A0A1W2PRG0 241 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 GTPBP10A4D1E9 387 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 FAM196BA6NMK8 535 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 POTECB2RU33 542 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 TCP10L2B9ZVM9 353 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 TRAF5O00463 557 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 MSH4O15457 936 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 PPP1R12BO60237 982 aaPredicted RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 TBCAO75347 108 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 MED24O75448 989 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 ICAM1P05362 532 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 MAPTP10636 758 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 PRLRP16471 622 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 KCNA3P22001 575 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 HSD17B4P51659 736 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 PRELPP51888 382 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 VAV2P52735 878 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 SNRPFP62306 86 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 CKAP4Q07065 602 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 KIF5AQ12840 1032 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 BRD3Q15059 726 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 EPHA7Q15375 998 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 ELF2Q15723 593 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 KNOP1Q1ED39 458 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 CCDC40Q4G0X9 1142 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 CEP55Q53EZ4 464 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 ZNF569Q5MCW4 686 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 C10orf76Q5T2E6 689 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 LCE2AQ5TA79 106 aaPredicted RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 XRRA1Q6P2D8 792 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 RSRC2Q7L4I2 434 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 KCNK18Q7Z418 384 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 CATSPER3Q86XQ3 398 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 PRPF38AQ8NAV1 312 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 TRIM58Q8NG06 486 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 TMEM174Q8WUU8 243 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 UBE2Q2Q8WVN8 375 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 RUBCNQ92622 972 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 VTI1AQ96AJ9 217 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 CCDC42Q96M95 316 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 NACC1Q96RE7 527 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 WDR24Q96S15 920 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 DESI2Q9BSY9 194 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 MKNK1Q9BUB5 465 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 CARD6Q9BX69 1037 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 KIAA1683Q9H0B3 1180 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 KCTD10Q9H3F6 313 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 NHEJ1Q9H9Q4 299 aaPredicted RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 TYW1Q9NV66 732 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 PGAP2Q9UHJ9 254 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 PCDHAC2Q9Y5I4 1007 aa9.12□□□□□ -0.95
SKA2-203ENST00000578105 BZW2Q9Y6E2 419 aaKnown RBP9.12□□□□□ -0.95
SKA2-203ENST00000578105 FER1L6Q2WGJ9 1857 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 CCDC151A5D8V7 595 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 E9PMD0 336 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 FAM86B1E9PN63 330 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 MEIS1O00470 390 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 OPLAHO14841 1288 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 CTNND1O60716 968 aaKnown RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 ERLIN1O75477 346 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 PSMD10O75832 226 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 RAD17O75943 681 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 FAM86B2P0C5J1 330 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 SPATA31C1P0DKV0 1188 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 DPEP1P16444 411 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 POLD1P28340 1107 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 ARHGAP25P42331 645 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 CHMP4BP1P59074 171 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 ITIH3Q06033 890 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 GIT2Q14161 759 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 MTF1Q14872 753 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 ECM1Q16610 540 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 USH1GQ495M9 461 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 DALRD3Q5D0E6 543 aaKnown RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 FAM83BQ5T0W9 1011 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 LRCH2Q5VUJ6 765 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 PAPD7Q5XG87 772 aaKnown RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 DCAF15Q66K64 600 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 NCAPH2Q6IBW4 605 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 WDR59Q6PJI9 974 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 TMCO3Q6UWJ1 677 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 EPM2AIP1Q7L775 607 aaPredicted RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 OTOP1Q7RTM1 612 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 KIAA1328Q86T90 577 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 TRIM59Q8IWR1 403 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 SMAP1Q8IYB5 467 aaPredicted RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 RNF10Q8N5U6 811 aaKnown RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 HNRNPLLQ8WVV9 542 aaKnown RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 JAKMIP2Q96AA8 810 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 PURBQ96QR8 312 aaKnown RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 HSD17B14Q9BPX1 270 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 EIF2AK1Q9BQI3 630 aaKnown RBP9.11□□□□□ -0.95
SKA2-203ENST00000578105 TEKT3Q9BXF9 490 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 TAOK3Q9H2K8 898 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 LZTFL1Q9NQ48 299 aa9.11□□□□□ -0.95
SKA2-203ENST00000578105 PLCB1Q9NQ66 1216 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms