RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 ZNF302Q9NR11 478 aa17.74■□□□□ 0.43
NCBP3-207ENST00000577169 SAMM50Q9Y512 469 aa17.74■□□□□ 0.43
NCBP3-207ENST00000577169 PCDHA10Q9Y5I2 948 aa17.74■□□□□ 0.43
NCBP3-207ENST00000577169 KAT6AQ92794 2004 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 WNT7AO00755 349 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 PSAPP07602 524 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 ATP2B1P20020 1258 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 ADAM17P78536 824 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 PPIGQ13427 754 aaKnown RBP eCLIP17.73■□□□□ 0.431e-8■■□□□ 13.5
NCBP3-207ENST00000577169 GNL2Q13823 731 aaKnown RBP17.73■□□□□ 0.43
NCBP3-207ENST00000577169 PLCB4Q15147 1175 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 SHHQ15465 462 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 PDXDC2PQ6P474 469 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 C16orf59Q7L2K0 433 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 CCDC60Q8IWA6 550 aaPredicted RBP17.73■□□□□ 0.43
NCBP3-207ENST00000577169 AFAP1L1Q8TED9 768 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 FAM20AQ96MK3 541 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 KCNMB3Q9NPA1 279 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 DISC1Q9NRI5 854 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 CEP290O15078 2479 aa17.73■□□□□ 0.43
NCBP3-207ENST00000577169 NRCAMQ92823 1304 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 DNAH12Q6ZR08 3092 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 WDR64B1ANS9 1081 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 CHMP2AO43633 222 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 MARCH6O60337 910 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 ACRP10323 421 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 INSRRP14616 1297 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 ATP4AP20648 1035 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 PPFIA1Q13136 1202 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 C9orf50Q5SZB4 431 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 SERINC5Q86VE9 423 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 TDHQ8IZJ6 230 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 HAS1Q92839 578 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 WNT8BQ93098 351 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 GABBR1Q9UBS5 961 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 TRPC6Q9Y210 931 aa17.72■□□□□ 0.43
NCBP3-207ENST00000577169 A0A1W2PPC1 479 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 POTEB3A0JP26 581 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 TBX3O15119 743 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 BAG4O95429 457 aaKnown RBP17.71■□□□□ 0.43
NCBP3-207ENST00000577169 CKBP12277 381 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 U2AF2P26368 475 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■■□□□ 13
NCBP3-207ENST00000577169 SFNP31947 248 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 SLC26A2P50443 739 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 IGBP1P78318 339 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 GRIK4Q16099 956 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 TRIM71Q2Q1W2 868 aaKnown RBP17.71■□□□□ 0.43
NCBP3-207ENST00000577169 POTEBQ6S5H4 581 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 B3GNT9Q6UX72 402 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 MIER3Q7Z3K6 550 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 CCDC155Q8N6L0 562 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 CAGE1Q8TC20 777 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
NCBP3-207ENST00000577169 IL23AQ9NPF7 189 aa17.71■□□□□ 0.43
NCBP3-207ENST00000577169 MAFBQ9Y5Q3 323 aaPredicted RBP17.71■□□□□ 0.43
NCBP3-207ENST00000577169 RRN3P2A6NIE6 340 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 HBP1O60381 514 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 JAK3P52333 1124 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 ZNF174Q15697 407 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 TMEM240Q5SV17 173 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 MARCH8Q5T0T0 291 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 ZNF618Q5T7W0 954 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
NCBP3-207ENST00000577169 ZNF365Q70YC5 407 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 TRMT1LQ7Z2T5 733 aaKnown RBP17.7■□□□□ 0.42
NCBP3-207ENST00000577169 NOSTRINQ8IVI9 506 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 CKAP2LQ8IYA6 745 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 RPUSD2Q8IZ73 545 aaKnown RBP17.7■□□□□ 0.42
NCBP3-207ENST00000577169 SNX21Q969T3 373 aa17.7■□□□□ 0.42
NCBP3-207ENST00000577169 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.7■□□□□ 0.427e-8■□□□□ 9.7
NCBP3-207ENST00000577169 MYH9P35579 1960 aaKnown RBP17.7■□□□□ 0.42
NCBP3-207ENST00000577169 H3BQV1 296 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
NCBP3-207ENST00000577169 EML1O00423 815 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 SELPP16109 830 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 MCM7P33993 719 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 THPOP40225 353 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 RBL2Q08999 1139 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 MCTP1Q6DN14 999 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 DEFB128Q7Z7B8 93 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 SLFN12Q8IYM2 578 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 RDM1Q8NG50 284 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 ATP8B4Q8TF62 1192 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 TRAPPC12Q8WVT3 735 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 VWCEQ96DN2 955 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 ZBTB10Q96DT7 871 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 VAV3Q9UKW4 847 aa17.69■□□□□ 0.42
NCBP3-207ENST00000577169 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
NCBP3-207ENST00000577169 MBLAC1A4D2B0 266 aaPredicted RBP17.68■□□□□ 0.42
NCBP3-207ENST00000577169 ZNF862O60290 1169 aa17.68■□□□□ 0.42
NCBP3-207ENST00000577169 FGBP02675 491 aa17.68■□□□□ 0.42
NCBP3-207ENST00000577169 PPP2R5CQ13362 524 aa17.68■□□□□ 0.42
NCBP3-207ENST00000577169 SCN5AQ14524 2016 aa17.68■□□□□ 0.42
NCBP3-207ENST00000577169 GPNMBQ14956 572 aa17.68■□□□□ 0.42
NCBP3-207ENST00000577169 CALCRLQ16602 461 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms