RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 IGBP1P78318 339 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 MDM2Q00987 491 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-215ENST00000576033 CYP4A11Q02928 519 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 GRIN1Q05586 938 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 PLCB4Q15147 1175 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 SAFBQ15424 915 aaKnown RBP eCLIP8.93□□□□□ -0.98
CCDC40-215ENST00000576033 MCTP2Q6DN12 878 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 NCAPH2Q6IBW4 605 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 PPP4R3AQ6IN85 833 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 SWSAP1Q6NVH7 229 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 B3GNT9Q6UX72 402 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 C4orf32Q8N8J7 132 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 CDHR1Q96JP9 859 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 HTATIP2Q9BUP3 242 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 WNT8AQ9H1J5 351 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 SETD4Q9NVD3 440 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 GABBR1Q9UBS5 961 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 GTF2IRD1Q9UHL9 959 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 EMSYQ7Z589 1322 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 IGSF9BQ9UPX0 1349 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 TET1Q8NFU7 2136 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 EVPLQ92817 2033 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 GBF1Q92538 1859 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 IGKV6D-21A0A0A0MT36 114 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 ZBTB42B2RXF5 422 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 H3BRB1 525 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 BACH1O14867 736 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 ZBTB39O15060 712 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 TREHO43280 583 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 ZEB2O60315 1214 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 LGR5O75473 907 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 ATG7O95352 703 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 CLTBP09497 229 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 CYP2C18P33260 490 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 TXKP42681 527 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 EPHB4P54760 987 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 CCL23P55773 120 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 PRKCEQ02156 737 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 CALCRLQ16602 461 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 TCTN1Q2MV58 587 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 MARCH8Q5T0T0 291 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 PLA2G4FQ68DD2 849 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 MOXD1Q6UVY6 613 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 ANKRD33Q7Z3H0 272 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 TEX2Q8IWB9 1127 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 FAM177A1Q8N128 213 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-215ENST00000576033 ZNF579Q8NAF0 562 aaKnown RBP8.92□□□□□ -0.98
CCDC40-215ENST00000576033 LMBR1Q8WVP7 490 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 SEPT1Q8WYJ6 367 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 GLG1Q92896 1179 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 BADQ92934 168 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 VWCEQ96DN2 955 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 SCLYQ96I15 445 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 MTMR9Q96QG7 549 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 TEKT3Q9BXF9 490 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 TUT1Q9H6E5 874 aaKnown RBP8.92□□□□□ -0.98
CCDC40-215ENST00000576033 BMP2KQ9NSY1 1161 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-215ENST00000576033 RGL1Q9NZL6 768 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 TBX21Q9UL17 535 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 KAT6AQ92794 2004 aa8.92□□□□□ -0.98
CCDC40-215ENST00000576033 STX6O43752 255 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 PPFIA4O75335 1185 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 CABYRO75952 493 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 CTSHP09668 335 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 GCFC2P16383 781 aaKnown RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 CDC25AP30304 524 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 HOXC8P31273 242 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 MAGEA10P43363 369 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 CEBPZQ03701 1054 aaKnown RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 TMEM62Q0P6H9 643 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 PPFIA1Q13136 1202 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 CTTNQ14247 550 aaKnown RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 ECM1Q16610 540 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 PTGISQ16647 500 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 BRDTQ58F21 947 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 C1orf53Q5VUE5 145 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 ZNF746Q6NUN9 644 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 CHRDL2Q6WN34 429 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 MIER3Q7Z3K6 550 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 C7orf31Q8N865 590 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 GIMAP8Q8ND71 665 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 DYDC2Q96IM9 177 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 ZNF668Q96K58 619 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 GBP4Q96PP9 640 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 PPP1R16BQ96T49 567 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 ZNF302Q9NR11 478 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.91□□□□□ -0.98
CCDC40-215ENST00000576033 DISC1Q9NRI5 854 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 TBC1D22BQ9NU19 505 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 TMEM39AQ9NV64 488 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 TRPC6Q9Y210 931 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 SAMM50Q9Y512 469 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 CLIC4Q9Y696 253 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 TRIOBPQ9H2D6 2365 aa8.91□□□□□ -0.98
CCDC40-215ENST00000576033 C17orf102A2RUQ5 167 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 WDR64B1ANS9 1081 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 MAFGO15525 162 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 MED24O75448 989 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 STBD1O95210 358 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms