RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 TROAPQ12815 778 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 XRRA1Q6P2D8 792 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 TSHZ1Q6ZSZ6 1077 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 ADGRD2Q7Z7M1 963 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 RSPH3Q86UC2 560 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 SMC5Q8IY18 1101 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 CMTR2Q8IYT2 770 aaKnown RBP11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 EFHBQ8N7U6 833 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 SMRP1Q8NCR6 262 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 GIMAP8Q8ND71 665 aaPredicted RBP11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 DNAJB3Q8WWF6 145 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 LINC01599Q8WXQ3 324 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 PBXIP1Q96AQ6 731 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 AGO3Q9H9G7 860 aaKnown RBP11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 MRPL42Q9Y6G3 142 aaKnown RBP11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 MYO15AQ9UKN7 3530 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 GSTTP1A0A1W2PQM5 241 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 MEIS2O14770 477 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 NDUFV1P49821 464 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 PTPN5P54829 565 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 RRP1P56182 461 aaKnown RBP11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 ZXDAP98168 799 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 SP4Q02446 784 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 TCF15Q12870 199 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 GRIK4Q16099 956 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 USP17L6PQ6QN14 398 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 KLHL23Q8NBE8 558 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 SEPT1Q8WYJ6 367 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 PPP2R3CQ969Q6 453 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 PRRX2Q99811 253 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 IL25Q9H293 177 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 SENP2Q9HC62 589 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 ERAP1Q9NZ08 941 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 TUBE1Q9UJT0 475 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 CDY2AQ9Y6F7 541 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 SQORQ9Y6N5 450 aa11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 BAZ2BQ9UIF8 2168 aaKnown RBP11.5□□□□□ -0.57
CALCOCO2-227ENST00000575560 PIK3CDO00329 1044 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 ST18O60284 1047 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 CSPG5O95196 566 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 GLP2RO95838 553 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 KCNA2P16389 499 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 CD52P31358 61 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 MRPS6P82932 125 aaKnown RBP11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 NLRX1Q86UT6 975 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 CHD1LQ86WJ1 897 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 NPAS4Q8IUM7 802 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 FBXL6Q8N531 539 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 POF1BQ8WVV4 589 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 GPRASP2Q96D09 838 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 FTHL17Q9BXU8 183 aa11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 ZFHX2Q9C0A1 2572 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO2-227ENST00000575560 VPS13AQ96RL7 3174 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 IFIT3O14879 490 aaKnown RBP11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 RPLP2P05387 115 aaKnown RBP11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 ITGB5P18084 799 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 NRIP1P48552 1158 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 NUCB1Q02818 461 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 IER5Q5VY09 327 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 B4GALNT3Q6L9W6 998 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 SMARCC2Q8TAQ2 1214 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 ATP8B4Q8TF62 1192 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 PHF7Q9BWX1 381 aaPredicted RBP11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 SMARCAD1Q9H4L7 1026 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 PADI3Q9ULW8 664 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 USP15Q9Y4E8 981 aaPredicted RBP11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 ZDBF2Q9HCK1 2354 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 DMDP11532 3685 aa11.48□□□□□ -0.57
CALCOCO2-227ENST00000575560 DOCK5Q9H7D0 1870 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 RRN3P2A6NIE6 340 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 CYP21A2P08686 494 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 STAG3L1P0CL83 205 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 INSRRP14616 1297 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 MARK3P27448 753 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 TRDNQ13061 729 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 RBM23Q86U06 439 aaKnown RBP11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 SUGP1Q8IWZ8 645 aaKnown RBP11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 IGDCC4Q8TDY8 1250 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 PIBF1Q8WXW3 757 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 SUSD6Q92537 303 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 GLG1Q92896 1179 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 CUL5Q93034 780 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 ZBTB10Q96DT7 871 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 ASIC4Q96FT7 647 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 CDHR1Q96JP9 859 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 PCYT2Q99447 389 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 MAP3K14Q99558 947 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 SPZ1Q9BXG8 430 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 BARX2Q9UMQ3 279 aaPredicted RBP11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 UBIAD1Q9Y5Z9 338 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 KAT6AQ92794 2004 aa11.47□□□□□ -0.57
CALCOCO2-227ENST00000575560 CACNA1HO95180 2353 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 IGSF9BQ9UPX0 1349 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 ERICH2A1L162 156 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 MAFGO15525 162 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 IGHDP01880 384 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 SCG2P13521 617 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 ATF7P17544 494 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms