RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 PCDHA10Q9Y5I2 948 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 TBX3O15119 743 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 DTNBO60941 627 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 PSMD10O75832 226 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 TDP2O95551 362 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 FGBP02675 491 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 PSAPP07602 524 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 CKBP12277 381 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 SFNP31947 248 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 ZNF200P98182 395 aaPredicted RBP15.36■□□□□ 0.05
CIITA-210ENST00000575513 PPFIA1Q13136 1202 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 LETM2Q2VYF4 491 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 TAF2Q6P1X5 1199 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 DIS3L2Q8IYB7 885 aaKnown RBP15.36■□□□□ 0.05
CIITA-210ENST00000575513 FBXO18Q8NFZ0 1043 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 ETNPPLQ8TBG4 499 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 LMBR1Q8WVP7 490 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 HERVK_113Q902F9 699 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 TMX3Q96JJ7 454 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 C8orf76Q96K31 380 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 FAM20AQ96MK3 541 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.36■□□□□ 0.05
CIITA-210ENST00000575513 KIF3AQ9Y496 699 aa15.36■□□□□ 0.05
CIITA-210ENST00000575513 MAFBQ9Y5Q3 323 aaPredicted RBP15.36■□□□□ 0.05
CIITA-210ENST00000575513 MBLAC1A4D2B0 266 aaPredicted RBP15.35■□□□□ 0.05
CIITA-210ENST00000575513 WDR64B1ANS9 1081 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 BTBD18B2RXH4 712 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 DDX39AO00148 427 aaKnown RBP15.35■□□□□ 0.05
CIITA-210ENST00000575513 TREHO43280 583 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 GAS7O60861 476 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 JAK3P52333 1124 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 NR5A1Q13285 461 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 PLCB4Q15147 1175 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 GRIK4Q16099 956 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 LRCH2Q5VUJ6 765 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 B3GNT9Q6UX72 402 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 ZNF365Q70YC5 407 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 LRRC8DQ7L1W4 858 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 FAM184AQ8NB25 1140 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 VWCEQ96DN2 955 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 SCLYQ96I15 445 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 RNPC3Q96LT9 517 aaKnown RBP15.35■□□□□ 0.05
CIITA-210ENST00000575513 TEKT3Q9BXF9 490 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 MTIF3Q9H2K0 278 aaKnown RBP15.35■□□□□ 0.05
CIITA-210ENST00000575513 FOXP1Q9H334 677 aaPredicted RBP15.35■□□□□ 0.05
CIITA-210ENST00000575513 KCNMB3Q9NPA1 279 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 ZNF302Q9NR11 478 aa15.35■□□□□ 0.05
CIITA-210ENST00000575513 POTEB3A0JP26 581 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 BACH1O14867 736 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 HBP1O60381 514 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 CCNT1O60563 726 aaKnown RBP15.34■□□□□ 0.05
CIITA-210ENST00000575513 CXCL10P02778 98 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 ACRP10323 421 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 INSRRP14616 1297 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 MARK3P27448 753 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 SMAD3P84022 425 aaKnown RBP15.34■□□□□ 0.05
CIITA-210ENST00000575513 EARS2Q5JPH6 523 aaKnown RBP15.34■□□□□ 0.05
CIITA-210ENST00000575513 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 POTEBQ6S5H4 581 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 CCDC60Q8IWA6 550 aaPredicted RBP15.34■□□□□ 0.05
CIITA-210ENST00000575513 ATP8B4Q8TF62 1192 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 DISC1Q9NRI5 854 aa15.34■□□□□ 0.05
CIITA-210ENST00000575513 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.33■□□□□ 0.04
CIITA-210ENST00000575513 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.33■□□□□ 0.04
CIITA-210ENST00000575513 SOX1O00570 391 aaPredicted RBP15.33■□□□□ 0.04
CIITA-210ENST00000575513 CD2BP2O95400 341 aaKnown RBP15.33■□□□□ 0.04
CIITA-210ENST00000575513 ACTN1P12814 892 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 THPOP40225 353 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 MARCH8Q5T0T0 291 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 ZNF618Q5T7W0 954 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 PDXDC2PQ6P474 469 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 TRAF7Q6Q0C0 670 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 SLFN12Q8IYM2 578 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 BBXQ8WY36 941 aaPredicted RBP15.33■□□□□ 0.04
CIITA-210ENST00000575513 WNT8BQ93098 351 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 TUBE1Q9UJT0 475 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 SAMM50Q9Y512 469 aa15.33■□□□□ 0.04
CIITA-210ENST00000575513 DOCK5Q9H7D0 1870 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 RSPH10B2B2RC85 870 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 SLC37A4O43826 429 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 RSPH10BP0C881 870 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 PPP2R5CQ13362 524 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 GPNMBQ14956 572 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 ZNF484Q5JVG2 852 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 FAM26DQ5JW98 314 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 FAM109BQ6ICB4 259 aaPredicted RBP15.32■□□□□ 0.04
CIITA-210ENST00000575513 RSPH3Q86UC2 560 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 FAM167AQ96KS9 214 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 UIMC1Q96RL1 719 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 UNC45AQ9H3U1 944 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.32■□□□□ 0.04
CIITA-210ENST00000575513 PCDHA2Q9Y5H9 948 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 COL1A2P08123 1366 aa15.32■□□□□ 0.04
CIITA-210ENST00000575513 BAIAP3O94812 1187 aa15.31■□□□□ 0.04
CIITA-210ENST00000575513 BAG4O95429 457 aaKnown RBP15.31■□□□□ 0.04
CIITA-210ENST00000575513 ATP4AP20648 1035 aa15.31■□□□□ 0.04
CIITA-210ENST00000575513 ORC2Q13416 577 aaPredicted RBP15.31■□□□□ 0.04
CIITA-210ENST00000575513 FAM43BQ6ZT52 329 aaPredicted RBP15.31■□□□□ 0.04
CIITA-210ENST00000575513 MIER3Q7Z3K6 550 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms