RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 EARS2Q5JPH6 523 aaKnown RBP23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 LRCH2Q5VUJ6 765 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 FAM160B1Q5W0V3 765 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 PLPPR4Q7Z2D5 763 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 DEFB128Q7Z7B8 93 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 SERINC5Q86VE9 423 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 SMAP1Q8IYB5 467 aaPredicted RBP23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 SLC5A5Q92911 643 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 WNT8BQ93098 351 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 LRCH3Q96II8 777 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 MBOAT7Q96N66 472 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 TEKT3Q9BXF9 490 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 TRPC6Q9Y210 931 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 SAMM50Q9Y512 469 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 FAM205CA6NFA0 338 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 CCNT1O60563 726 aaKnown RBP23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 SELPP16109 830 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 RFC2P35250 354 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 RBL2Q08999 1139 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 SAFBQ15424 915 aaKnown RBP eCLIP23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 GRIK4Q16099 956 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 TRIM71Q2Q1W2 868 aaKnown RBP23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 LRRC8DQ7L1W4 858 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 CCDC60Q8IWA6 550 aaPredicted RBP23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 TNFRSF25Q93038 417 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 GJA10Q969M2 543 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 TMX3Q96JJ7 454 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 RIT2Q99578 217 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 ZNF302Q9NR11 478 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 SZT2Q5T011 3432 aa23.42■■□□□ 1.34
HCFC1R1-208ENST00000575214 IGKV6D-21A0A0A0MT36 114 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 CHMP2AO43633 222 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 SLC37A4O43826 429 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 FGBP02675 491 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 PSAPP07602 524 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 GCFC2P16383 781 aaKnown RBP23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 THPOP40225 353 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 IGBP1P78318 339 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 PLCB4Q15147 1175 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 SWSAP1Q6NVH7 229 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 PDXDC2PQ6P474 469 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 TNPO1Q92973 898 aaKnown RBP23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 NAP1L4Q99733 375 aaKnown RBP23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 PCDHA10Q9Y5I2 948 aa23.41■■□□□ 1.34
HCFC1R1-208ENST00000575214 WDR64B1ANS9 1081 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 PFKMP08237 780 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 SLC26A2P50443 739 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 ADAM17P78536 824 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 PPP4R3AQ6IN85 833 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 OTOP2Q7RTS6 562 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 ETNPPLQ8TBG4 499 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 POTEB3A0JP26 581 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 PSMD10O75832 226 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 INSRRP14616 1297 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 ZNF618Q5T7W0 954 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 POTEBQ6S5H4 581 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 FTOQ9C0B1 505 aaKnown RBP eCLIP23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 MTIF3Q9H2K0 278 aaKnown RBP23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 UNC45AQ9H3U1 944 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 DISC1Q9NRI5 854 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 TUBE1Q9UJT0 475 aa23.4■■□□□ 1.34
HCFC1R1-208ENST00000575214 RRN3P2A6NIE6 340 aa23.39■■□□□ 1.33
HCFC1R1-208ENST00000575214 PARNO95453 639 aaKnown RBP23.39■■□□□ 1.33
HCFC1R1-208ENST00000575214 CKAP2LQ8IYA6 745 aa23.39■■□□□ 1.33
HCFC1R1-208ENST00000575214 HERVK_113Q902F9 699 aa23.39■■□□□ 1.33
HCFC1R1-208ENST00000575214 VWCEQ96DN2 955 aa23.39■■□□□ 1.33
HCFC1R1-208ENST00000575214 GABBR1Q9UBS5 961 aa23.39■■□□□ 1.33
HCFC1R1-208ENST00000575214 TANC1Q9C0D5 1861 aa23.38■■□□□ 1.33
HCFC1R1-208ENST00000575214 MARCH6O60337 910 aa23.38■■□□□ 1.33
HCFC1R1-208ENST00000575214 SFNP31947 248 aa23.38■■□□□ 1.33
HCFC1R1-208ENST00000575214 JAK3P52333 1124 aa23.38■■□□□ 1.33
HCFC1R1-208ENST00000575214 FBXO18Q8NFZ0 1043 aa23.38■■□□□ 1.33
HCFC1R1-208ENST00000575214 ATP8B4Q8TF62 1192 aa23.38■■□□□ 1.33
HCFC1R1-208ENST00000575214 KIF3AQ9Y496 699 aa23.38■■□□□ 1.33
HCFC1R1-208ENST00000575214 TRIP12Q14669 1992 aaPredicted RBP23.38■■□□□ 1.33
HCFC1R1-208ENST00000575214 ZBBXA8MT70 800 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 RSPH10B2B2RC85 870 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 HBP1O60381 514 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 CAND2O75155 1236 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 CTSHP09668 335 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 RSPH10BP0C881 870 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 GNL2Q13823 731 aaKnown RBP23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 MARCH8Q5T0T0 291 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 TAF2Q6P1X5 1199 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 RUFY4Q6ZNE9 571 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 TRMT1LQ7Z2T5 733 aaKnown RBP23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 MIER3Q7Z3K6 550 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 TRAPPC12Q8WVT3 735 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 FAM20AQ96MK3 541 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 KCNMB3Q9NPA1 279 aa23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 MAFBQ9Y5Q3 323 aaPredicted RBP23.37■■□□□ 1.33
HCFC1R1-208ENST00000575214 MBLAC1A4D2B0 266 aaPredicted RBP23.36■■□□□ 1.33
HCFC1R1-208ENST00000575214 ACTN1P12814 892 aa23.36■■□□□ 1.33
HCFC1R1-208ENST00000575214 RASIP1Q5U651 963 aa23.36■■□□□ 1.33
HCFC1R1-208ENST00000575214 TRAF7Q6Q0C0 670 aa23.36■■□□□ 1.33
HCFC1R1-208ENST00000575214 CXXC1Q9P0U4 656 aaPredicted RBP23.36■■□□□ 1.33
HCFC1R1-208ENST00000575214 IGSF9BQ9UPX0 1349 aa23.35■■□□□ 1.33
HCFC1R1-208ENST00000575214 NBNO60934 754 aa23.35■■□□□ 1.33
HCFC1R1-208ENST00000575214 GPNMBQ14956 572 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms