RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 PPP1R9AQ9ULJ8 1098 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 GUCA1BQ9UMX6 200 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 PLAGL2Q9UPG8 496 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 CTAGE9A4FU28 777 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 EFCAB8A8MWE9 144 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 DDX39AO00148 427 aaKnown RBP15.5■□□□□ 0.07
VPS33B-208ENST00000574755 ZBTB39O15060 712 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 PRPF6O94906 941 aaKnown RBP15.5■□□□□ 0.07
VPS33B-208ENST00000574755 USP14P54578 494 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 PPP2R3AQ06190 1150 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 SPP2Q13103 211 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 MUM1L1Q5H9M0 696 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 TRIM59Q8IWR1 403 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 HAUS4Q9H6D7 363 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 PKD2L1Q9P0L9 805 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 TRAF3IP3Q9Y228 551 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 RPTORQ8N122 1335 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 ZNF541Q9H0D2 1346 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 SFI1A8K8P3 1242 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 MUTP22033 750 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 EPS15P42566 896 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 HERVK_113P62684 666 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 CDK17Q00537 523 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 EPHA7Q15375 998 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 CACNA2D4Q7Z3S7 1137 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 KIAA1328Q86T90 577 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 ZC3H3Q8IXZ2 948 aaKnown RBP15.5■□□□□ 0.07
VPS33B-208ENST00000574755 IL31RAQ8NI17 732 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 CCDC42Q96M95 316 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 NACC1Q96RE7 527 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 RIT2Q99578 217 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 SGIP1Q9BQI5 828 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 KCNH7Q9NS40 1196 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 TRIM10Q9UDY6 481 aa15.5■□□□□ 0.07
VPS33B-208ENST00000574755 EIF3CLB5ME19 914 aaKnown RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 TADA3O75528 432 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 FAM13AO94988 1023 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 BCRP11274 1271 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 GAP43P17677 238 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 HNRNPH3P31942 346 aaKnown RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 KCNMA1Q12791 1236 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 CCDC122Q5T0U0 273 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 ANGEL2Q5VTE6 544 aaKnown RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 PRAMEF18Q5VWM3 479 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 RRAGAQ7L523 313 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 SCYL3Q8IZE3 742 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 ZKSCAN4Q969J2 545 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 WRNIP1Q96S55 665 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 EIF3CQ99613 913 aaKnown RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 LXNQ9BS40 222 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 BCAS3Q9H6U6 928 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 OLFML3Q9NRN5 406 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 WRAP73Q9P2S5 460 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 LOXHD1Q8IVV2 1947 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 LRRC53A6NM62 1247 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 PDXKO00764 312 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 CALUO43852 315 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 ZBED4O75132 1171 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 HOXD13P35453 343 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 B3GNT9Q6UX72 402 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 C1orf186Q6ZWK4 172 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 MYCT1Q8N699 235 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 BANK1Q8NDB2 785 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 NAPGQ99747 312 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 CCDC94Q9BW85 323 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-208ENST00000574755 PICK1Q9NRD5 415 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 FAM184BQ9ULE4 1060 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 TFR2Q9UP52 801 aa15.49■□□□□ 0.07
VPS33B-208ENST00000574755 PLEKP08567 350 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-208ENST00000574755 RPS6P62753 249 aaKnown RBP15.48■□□□□ 0.07
VPS33B-208ENST00000574755 GHRHRQ02643 423 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 BMT2Q1RMZ1 405 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 PCNX4Q63HM2 1172 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 FBXO38Q6PIJ6 1188 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 SYTL5Q8TDW5 730 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-208ENST00000574755 PARVGQ9HBI0 331 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 AS3MTQ9HBK9 375 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 TYW1Q9NV66 732 aaKnown RBP15.48■□□□□ 0.07
VPS33B-208ENST00000574755 MAP3K20Q9NYL2 800 aaKnown RBP15.48■□□□□ 0.07
VPS33B-208ENST00000574755 FZD1Q9UP38 647 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 PARP14Q460N5 1801 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 KRT86O43790 486 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 EIF2AK2P19525 551 aaKnown RBP15.48■□□□□ 0.07
VPS33B-208ENST00000574755 BACE1P56817 501 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 APOBEC3FQ8IUX4 373 aaKnown RBP15.48■□□□□ 0.07
VPS33B-208ENST00000574755 JAKMIP2Q96AA8 810 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 DEF6Q9H4E7 631 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 ARHGAP20Q9P2F6 1191 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 FRMPD4Q14CM0 1322 aa15.48■□□□□ 0.07
VPS33B-208ENST00000574755 MYH11P35749 1972 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 CYP27A1Q02318 531 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 MTMR1Q13613 665 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 SPA17Q15506 151 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 TKFCQ3LXA3 575 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 NIPA1Q7RTP0 329 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 MIER3Q7Z3K6 550 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 ZNF280CQ8ND82 737 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 NLGN2Q8NFZ4 835 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 BAP1Q92560 729 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms