RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 RASGRP4Q8TDF6 673 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 ATP6V0A1Q93050 837 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 SENP7Q9BQF6 1050 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 AGXT2Q9BYV1 514 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 ZNF576Q9H609 170 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 SETD4Q9NVD3 440 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 MSRAQ9UJ68 235 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 ZNF215Q9UL58 517 aaPredicted RBP11.41□□□□□ -0.58
RPA1-206ENST00000573994 CYP46A1Q9Y6A2 500 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
RPA1-206ENST00000573994 TREHO43280 583 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 NBNO60934 754 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 ARP10275 920 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 PDIA3P30101 505 aaKnown RBP11.4□□□□□ -0.58
RPA1-206ENST00000573994 SREBF1P36956 1147 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 CLK2P49760 499 aaKnown RBP11.4□□□□□ -0.58
RPA1-206ENST00000573994 FOSBP53539 338 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 ARHGAP4P98171 946 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 AKAP17AQ02040 695 aaKnown RBP11.4□□□□□ -0.58
RPA1-206ENST00000573994 RBL2Q08999 1139 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 STK3Q13188 491 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 AP3B2Q13367 1082 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 MBTPS1Q14703 1052 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 PKN1Q16512 942 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 SERINC5Q86VE9 423 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 SPRYD3Q8NCJ5 442 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 GIMAP8Q8ND71 665 aaPredicted RBP11.4□□□□□ -0.58
RPA1-206ENST00000573994 SLC17A8Q8NDX2 589 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 MAFAQ8NHW3 353 aaPredicted RBP11.4□□□□□ -0.58
RPA1-206ENST00000573994 UIMC1Q96RL1 719 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 MXRA8Q9BRK3 442 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 GLT8D2Q9H1C3 349 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 JPH1Q9HDC5 661 aaPredicted RBP11.4□□□□□ -0.58
RPA1-206ENST00000573994 VPS54Q9P1Q0 977 aa11.4□□□□□ -0.58
RPA1-206ENST00000573994 SCN5AQ14524 2016 aa11.4□□□□□ -0.59
RPA1-206ENST00000573994 GSTTP1A0A1W2PQM5 241 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 DDX39AO00148 427 aaKnown RBP11.39□□□□□ -0.59
RPA1-206ENST00000573994 MAFGO15525 162 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 PRPF3O43395 683 aaKnown RBP11.39□□□□□ -0.59
RPA1-206ENST00000573994 EIF5BO60841 1220 aaKnown RBP11.39□□□□□ -0.59
RPA1-206ENST00000573994 FOSP01100 380 aaPredicted RBP11.39□□□□□ -0.59
RPA1-206ENST00000573994 HOXC8P31273 242 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 ITGB3BPQ13352 177 aaPredicted RBP11.39□□□□□ -0.59
RPA1-206ENST00000573994 NTRK3Q16288 839 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 CEP55Q53EZ4 464 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 PPP2R2DQ66LE6 453 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 TMCO2Q7Z6W1 182 aaPredicted RBP11.39□□□□□ -0.59
RPA1-206ENST00000573994 REXO1Q8N1G1 1221 aaKnown RBP11.39□□□□□ -0.59
RPA1-206ENST00000573994 PRUNE2Q8WUY3 3088 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 LMBR1Q8WVP7 490 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 RNPEPQ9H4A4 650 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 PRDM12Q9H4Q4 367 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 AGO4Q9HCK5 861 aaKnown RBP11.39□□□□□ -0.59
RPA1-206ENST00000573994 KCNH7Q9NS40 1196 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 PDRG1Q9NUG6 133 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
RPA1-206ENST00000573994 DOCK5Q9H7D0 1870 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 ESYT2A0FGR8 921 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 FAM86B1E9PN63 330 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 DTNBO60941 627 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 PARNO95453 639 aaKnown RBP11.38□□□□□ -0.59
RPA1-206ENST00000573994 CXCL10P02778 98 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 CA3P07451 260 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 FAM86B2P0C5J1 330 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 IFNAR1P17181 557 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 ZNF76P36508 570 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 KCNJ6P48051 423 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 EVCP57679 992 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 WDR5P61964 334 aaKnown RBP11.38□□□□□ -0.59
RPA1-206ENST00000573994 DEFB103AP81534 67 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 CNKSR3Q6P9H4 555 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 RUFY4Q6ZNE9 571 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 CCDC12Q8WUD4 166 aaPredicted RBP11.38□□□□□ -0.59
RPA1-206ENST00000573994 SEPT1Q8WYJ6 367 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 GLG1Q92896 1179 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 ZBTB10Q96DT7 871 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 SLC9A7Q96T83 725 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 SDF4Q9BRK5 362 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 RNF26Q9BY78 433 aaPredicted RBP11.38□□□□□ -0.59
RPA1-206ENST00000573994 TM6SF1Q9BZW5 370 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 C6orf50Q9HD87 102 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 SLC9A2Q9UBY0 812 aa11.38□□□□□ -0.59
RPA1-206ENST00000573994 VCANP13611 3396 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 RSPH10B2B2RC85 870 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 CPLX1O14810 134 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 BAIAP3O94812 1187 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 ARHGEF15O94989 841 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 RSPH10BP0C881 870 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 ACTR2P61160 394 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 IGBP1P78318 339 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 GRIK4Q16099 956 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 MCTP2Q6DN12 878 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 PLA2G4DQ86XP0 818 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 HERC6Q8IVU3 1022 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 USP38Q8NB14 1042 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 CCDC148Q8NFR7 591 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms