RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 MICAL3Q7RTP6 2002 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 GJB5O95377 273 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 CHRNA1P02708 482 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 MARK3P27448 753 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 MGAT3Q09327 533 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 PPFIA1Q13136 1202 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 GRIK4Q16099 956 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMG6-214ENST00000573827 REXO1Q8N1G1 1221 aaKnown RBP19.87■□□□□ 0.77
SMG6-214ENST00000573827 RASGRP4Q8TDF6 673 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 LENG9Q96B70 501 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 ZNF274Q96GC6 653 aaPredicted RBP19.87■□□□□ 0.77
SMG6-214ENST00000573827 LARP6Q9BRS8 491 aaKnown RBP19.87■□□□□ 0.77
SMG6-214ENST00000573827 SLC26A6Q9BXS9 759 aa19.87■□□□□ 0.77
SMG6-214ENST00000573827 SIP14410 1827 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 CTSHP09668 335 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 CIITAP33076 1130 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 KCNJ6P48051 423 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 NPY5RQ15761 445 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 ABHD15Q6UXT9 468 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 ZBTB10Q96DT7 871 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 C6orf50Q9HD87 102 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 VPS54Q9P1Q0 977 aa19.86■□□□□ 0.77
SMG6-214ENST00000573827 EFCAB14O75071 495 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 INSRRP14616 1297 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 POU3F3P20264 500 aaPredicted RBP19.85■□□□□ 0.77
SMG6-214ENST00000573827 IKBKEQ14164 716 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 PLCB4Q15147 1175 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 TAF2Q6P1X5 1199 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 PLPPR4Q7Z2D5 763 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 PLA2G4DQ86XP0 818 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 CCDC12Q8WUD4 166 aaPredicted RBP19.85■□□□□ 0.77
SMG6-214ENST00000573827 GLG1Q92896 1179 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 GAS2L1Q99501 681 aaPredicted RBP19.85■□□□□ 0.77
SMG6-214ENST00000573827 SDF4Q9BRK5 362 aa19.85■□□□□ 0.77
SMG6-214ENST00000573827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.84■□□□□ 0.77
SMG6-214ENST00000573827 M0R2N6 131 aa19.84■□□□□ 0.77
SMG6-214ENST00000573827 RFXAPO00287 272 aa19.84■□□□□ 0.77
SMG6-214ENST00000573827 DLL1O00548 723 aa19.84■□□□□ 0.77
SMG6-214ENST00000573827 GNA11P29992 359 aa19.84■□□□□ 0.77
SMG6-214ENST00000573827 MCTP2Q6DN12 878 aa19.84■□□□□ 0.77
SMG6-214ENST00000573827 PRDM6Q9NQX0 595 aa19.84■□□□□ 0.77
SMG6-214ENST00000573827 SH3GLB2Q9NR46 395 aa19.84■□□□□ 0.77
SMG6-214ENST00000573827 TUBE1Q9UJT0 475 aa19.84■□□□□ 0.77
SMG6-214ENST00000573827 TLL1O43897 1013 aa19.83■□□□□ 0.77
SMG6-214ENST00000573827 LPXNO60711 386 aa19.83■□□□□ 0.77
SMG6-214ENST00000573827 HTRA4P83105 476 aaPredicted RBP19.83■□□□□ 0.77
SMG6-214ENST00000573827 CCDC60Q8IWA6 550 aaPredicted RBP19.83■□□□□ 0.77
SMG6-214ENST00000573827 RAD9AQ99638 391 aa19.83■□□□□ 0.77
SMG6-214ENST00000573827 CERS4Q9HA82 394 aa19.83■□□□□ 0.77
SMG6-214ENST00000573827 PDRG1Q9NUG6 133 aa19.83■□□□□ 0.77
SMG6-214ENST00000573827 KIF28PB7ZC32 967 aa19.82■□□□□ 0.76
SMG6-214ENST00000573827 IPO5O00410 1097 aaKnown RBP19.82■□□□□ 0.76
SMG6-214ENST00000573827 ATP4AP20648 1035 aa19.82■□□□□ 0.76
SMG6-214ENST00000573827 STAT5BP51692 787 aa19.82■□□□□ 0.76
SMG6-214ENST00000573827 AKAP17AQ02040 695 aaKnown RBP19.82■□□□□ 0.76
SMG6-214ENST00000573827 CCDC148Q8NFR7 591 aa19.82■□□□□ 0.76
SMG6-214ENST00000573827 AIFM3Q96NN9 605 aa19.82■□□□□ 0.76
SMG6-214ENST00000573827 UIMC1Q96RL1 719 aa19.82■□□□□ 0.76
SMG6-214ENST00000573827 COL25A1Q9BXS0 654 aaPredicted RBP19.82■□□□□ 0.76
SMG6-214ENST00000573827 RRN3P2A6NIE6 340 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 ZBTB42B2RXF5 422 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 ZNF76P36508 570 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 ANAPC15P60006 121 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 SCRN1Q12765 414 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 LPIN1Q14693 890 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 BICD2Q8TD16 824 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 SP7Q8TDD2 431 aaPredicted RBP19.81■□□□□ 0.76
SMG6-214ENST00000573827 TRAPPC12Q8WVT3 735 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 DNAJB3Q8WWF6 145 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 SEPT8Q92599 483 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 AZI2Q9H6S1 392 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 TPCN1Q9ULQ1 816 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 MTCH2Q9Y6C9 303 aa19.81■□□□□ 0.76
SMG6-214ENST00000573827 LINC01553A4QN01 128 aa19.8■□□□□ 0.76
SMG6-214ENST00000573827 DDX39AO00148 427 aaKnown RBP19.8■□□□□ 0.76
SMG6-214ENST00000573827 DEXIO95424 95 aa19.8■□□□□ 0.76
SMG6-214ENST00000573827 SLC26A2P50443 739 aa19.8■□□□□ 0.76
SMG6-214ENST00000573827 SETQ01105 290 aaPredicted RBP19.8■□□□□ 0.76
SMG6-214ENST00000573827 FBXO47Q5MNV8 452 aa19.8■□□□□ 0.76
SMG6-214ENST00000573827 DAGLBQ8NCG7 672 aa19.8■□□□□ 0.76
SMG6-214ENST00000573827 ZNF577Q9BSK1 485 aa19.8■□□□□ 0.76
SMG6-214ENST00000573827 PCDHA2Q9Y5H9 948 aa19.8■□□□□ 0.76
SMG6-214ENST00000573827 COL4A6Q14031 1691 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 POTEB3A0JP26 581 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 PFKFB2O60825 505 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 CTDNEP1O95476 244 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 GHRP10912 638 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 IGFBP4P22692 258 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 ERVK-21P61565 698 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 IGBP1P78318 339 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 SSRP1Q08945 709 aaKnown RBP19.79■□□□□ 0.76
SMG6-214ENST00000573827 STK3Q13188 491 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 PRR16Q569H4 304 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 KRT40Q6A162 431 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 ZNF746Q6NUN9 644 aaPredicted RBP19.79■□□□□ 0.76
SMG6-214ENST00000573827 POTEBQ6S5H4 581 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 TRIM22Q8IYM9 498 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 ATP8B4Q8TF62 1192 aa19.79■□□□□ 0.76
SMG6-214ENST00000573827 ARNTL2Q8WYA1 636 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms