RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 DIS3L2Q8IYB7 885 aaKnown RBP23.4■■□□□ 1.34
CHMP6-204ENST00000572778 FAM184AQ8NB25 1140 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 LMBR1Q8WVP7 490 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 GJA10Q969M2 543 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 DDX25Q9UHL0 483 aaKnown RBP23.4■■□□□ 1.34
CHMP6-204ENST00000572778 TRPC6Q9Y210 931 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 SAMM50Q9Y512 469 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 BTBD18B2RXH4 712 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 RFC2P35250 354 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 THPOP40225 353 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 IGBP1P78318 339 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 RBL2Q08999 1139 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 PLCB4Q15147 1175 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 GRIK4Q16099 956 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 TRIM71Q2Q1W2 868 aaKnown RBP23.39■■□□□ 1.33
CHMP6-204ENST00000572778 LRCH2Q5VUJ6 765 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 SWSAP1Q6NVH7 229 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 OTOP2Q7RTS6 562 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 SLC5A5Q92911 643 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 TNPO1Q92973 898 aaKnown RBP23.39■■□□□ 1.33
CHMP6-204ENST00000572778 C8orf76Q96K31 380 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 RIT2Q99578 217 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 FTOQ9C0B1 505 aaKnown RBP eCLIP23.39■■□□□ 1.33
CHMP6-204ENST00000572778 ZNF302Q9NR11 478 aa23.39■■□□□ 1.33
CHMP6-204ENST00000572778 IGKV6D-21A0A0A0MT36 114 aa23.38■■□□□ 1.33
CHMP6-204ENST00000572778 FAM205CA6NFA0 338 aa23.38■■□□□ 1.33
CHMP6-204ENST00000572778 CCNT1O60563 726 aaKnown RBP23.38■■□□□ 1.33
CHMP6-204ENST00000572778 CD2BP2O95400 341 aaKnown RBP23.38■■□□□ 1.33
CHMP6-204ENST00000572778 PFKMP08237 780 aa23.38■■□□□ 1.33
CHMP6-204ENST00000572778 INSRRP14616 1297 aa23.38■■□□□ 1.33
CHMP6-204ENST00000572778 SAFBQ15424 915 aaKnown RBP eCLIP23.38■■□□□ 1.33
CHMP6-204ENST00000572778 ZNF618Q5T7W0 954 aa23.38■■□□□ 1.33
CHMP6-204ENST00000572778 CCDC60Q8IWA6 550 aaPredicted RBP23.38■■□□□ 1.33
CHMP6-204ENST00000572778 SMAP1Q8IYB5 467 aaPredicted RBP23.38■■□□□ 1.33
CHMP6-204ENST00000572778 MBOAT7Q96N66 472 aa23.38■■□□□ 1.33
CHMP6-204ENST00000572778 TEKT3Q9BXF9 490 aa23.38■■□□□ 1.33
CHMP6-204ENST00000572778 PCDHA10Q9Y5I2 948 aa23.38■■□□□ 1.33
CHMP6-204ENST00000572778 POTEB3A0JP26 581 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 CHMP2AO43633 222 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 SLC37A4O43826 429 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 PSAPP07602 524 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 SLC26A2P50443 739 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 ADAM17P78536 824 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 PDXDC2PQ6P474 469 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 POTEBQ6S5H4 581 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 HERVK_113Q902F9 699 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 TNFRSF25Q93038 417 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 VWCEQ96DN2 955 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 TMX3Q96JJ7 454 aa23.37■■□□□ 1.33
CHMP6-204ENST00000572778 NAP1L4Q99733 375 aaKnown RBP23.37■■□□□ 1.33
CHMP6-204ENST00000572778 MTIF3Q9H2K0 278 aaKnown RBP23.37■■□□□ 1.33
CHMP6-204ENST00000572778 RRN3P2A6NIE6 340 aa23.36■■□□□ 1.33
CHMP6-204ENST00000572778 WDR64B1ANS9 1081 aa23.36■■□□□ 1.33
CHMP6-204ENST00000572778 GCFC2P16383 781 aaKnown RBP23.36■■□□□ 1.33
CHMP6-204ENST00000572778 MCM2P49736 904 aa23.36■■□□□ 1.33
CHMP6-204ENST00000572778 PPP4R3AQ6IN85 833 aa23.36■■□□□ 1.33
CHMP6-204ENST00000572778 CKAP2LQ8IYA6 745 aa23.36■■□□□ 1.33
CHMP6-204ENST00000572778 UNC45AQ9H3U1 944 aa23.36■■□□□ 1.33
CHMP6-204ENST00000572778 DISC1Q9NRI5 854 aa23.36■■□□□ 1.33
CHMP6-204ENST00000572778 TUBE1Q9UJT0 475 aa23.36■■□□□ 1.33
CHMP6-204ENST00000572778 ZBBXA8MT70 800 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 RSPH10B2B2RC85 870 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 MARCH6O60337 910 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 PSMD10O75832 226 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 PARNO95453 639 aaKnown RBP23.35■■□□□ 1.33
CHMP6-204ENST00000572778 CTSHP09668 335 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 RSPH10BP0C881 870 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 ACTN1P12814 892 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 ETNPPLQ8TBG4 499 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 CXXC1Q9P0U4 656 aaPredicted RBP23.35■■□□□ 1.33
CHMP6-204ENST00000572778 GABBR1Q9UBS5 961 aa23.35■■□□□ 1.33
CHMP6-204ENST00000572778 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.34■■□□□ 1.33
CHMP6-204ENST00000572778 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.34■■□□□ 1.33
CHMP6-204ENST00000572778 MARCH8Q5T0T0 291 aa23.34■■□□□ 1.33
CHMP6-204ENST00000572778 RASIP1Q5U651 963 aa23.34■■□□□ 1.33
CHMP6-204ENST00000572778 TRAF7Q6Q0C0 670 aa23.34■■□□□ 1.33
CHMP6-204ENST00000572778 RUFY4Q6ZNE9 571 aa23.34■■□□□ 1.33
CHMP6-204ENST00000572778 TRMT1LQ7Z2T5 733 aaKnown RBP23.34■■□□□ 1.33
CHMP6-204ENST00000572778 ATP8B4Q8TF62 1192 aa23.34■■□□□ 1.33
CHMP6-204ENST00000572778 TRAPPC12Q8WVT3 735 aa23.34■■□□□ 1.33
CHMP6-204ENST00000572778 HBP1O60381 514 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 NBNO60934 754 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 SFNP31947 248 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 JAK3P52333 1124 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 SMAD3P84022 425 aaKnown RBP23.33■■□□□ 1.33
CHMP6-204ENST00000572778 GPNMBQ14956 572 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 TAF2Q6P1X5 1199 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 MIER3Q7Z3K6 550 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 FBXO18Q8NFZ0 1043 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 ZBTB10Q96DT7 871 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 KCNMB3Q9NPA1 279 aa23.33■■□□□ 1.33
CHMP6-204ENST00000572778 MAFBQ9Y5Q3 323 aaPredicted RBP23.33■■□□□ 1.33
CHMP6-204ENST00000572778 LAMA3Q16787 3333 aa23.33■■□□□ 1.32
CHMP6-204ENST00000572778 CAND2O75155 1236 aa23.32■■□□□ 1.32
CHMP6-204ENST00000572778 ATP4AP20648 1035 aa23.32■■□□□ 1.32
CHMP6-204ENST00000572778 GNL2Q13823 731 aaKnown RBP23.32■■□□□ 1.32
CHMP6-204ENST00000572778 RSPH3Q86UC2 560 aa23.32■■□□□ 1.32
CHMP6-204ENST00000572778 POTEDQ86YR6 584 aa23.32■■□□□ 1.32
CHMP6-204ENST00000572778 FAM20AQ96MK3 541 aa23.32■■□□□ 1.32
CHMP6-204ENST00000572778 SLC4A7Q9Y6M7 1214 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms