RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CAPN15O75808 1086 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 MNX1P50219 401 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 FXR2P51116 673 aaKnown RBP eCLIP16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 PSMC6P62333 389 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 KRT85P78386 507 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 MFSD10Q14728 455 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 KIAA0753Q2KHM9 967 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 B3GNT9Q6UX72 402 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 CCDC60Q8IWA6 550 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 C16orf70Q9BSU1 422 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 LRWD1Q9UFC0 647 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 F2P00734 622 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 MARK3P27448 753 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 ITGA7Q13683 1181 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 PDIA5Q14554 519 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 SLC39A14Q15043 492 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 PTPAQ15257 358 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 PLPPR4Q7Z2D5 763 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 KAT2BQ92831 832 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 ATP6V0A1Q93050 837 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 STK24Q9Y6E0 443 aa16.3■□□□□ 0.2
NPLOC4-209ENST00000572760 LOXHD1Q8IVV2 1947 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 IGKV6D-21A0A0A0MT36 114 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 SPTLC2O15270 562 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 YEATS4O95619 227 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 P4HBP07237 508 aaKnown RBP16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 COL6A1P12109 1028 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 SLC26A2P50443 739 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 CYP4A11Q02928 519 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 SPIRE1Q08AE8 756 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 NBPF20Q3BBV1 942 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 SLC39A5Q6ZMH5 540 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 C7orf31Q8N865 590 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 NEK9Q8TD19 979 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 AFAP1L1Q8TED9 768 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 DYDC2Q96IM9 177 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 PCYT2Q99447 389 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 EIF2AK1Q9BQI3 630 aaKnown RBP16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 SEZ6LQ9BYH1 1024 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 TRPC6Q9Y210 931 aa16.29■□□□□ 0.2
NPLOC4-209ENST00000572760 ARVCFO00192 962 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 QARSP47897 775 aaKnown RBP16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 PSMC5P62195 406 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 KRT79Q5XKE5 535 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 TPH2Q8IWU9 490 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 PPP1R13LQ8WUF5 828 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 FAM167AQ96KS9 214 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 SPATA32Q96LK8 384 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 HTATIP2Q9BUP3 242 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 NRBP2Q9NSY0 501 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 RGL1Q9NZL6 768 aa16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 MAFBQ9Y5Q3 323 aaPredicted RBP16.28■□□□□ 0.2
NPLOC4-209ENST00000572760 ALPK3Q96L96 1907 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 MROH7Q68CQ1 1323 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 IGSF9BQ9UPX0 1349 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 POTEB3A0JP26 581 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 HAS3O00219 553 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 LONP1P36776 959 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 CCT6AP40227 531 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 PLCB4Q15147 1175 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 IL17AQ16552 155 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 POTEBQ6S5H4 581 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 RASSF8Q8NHQ8 419 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 KCNG4Q8TDN1 519 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 AK8Q96MA6 479 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 LXNQ9BS40 222 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 ZSWIM4Q9H7M6 989 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 HDAC6Q9UBN7 1215 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 NOD1Q9Y239 953 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-209ENST00000572760 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 HBP1O60381 514 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 PPP6R2O75170 966 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 OATP04181 439 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 SMIM10L2AP0DMW4 78 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 SMIM10L2BP0DMW5 78 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 GNAT1P11488 350 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 UBA7P41226 1012 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 ME1P48163 572 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 RTP1P59025 263 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 PRKCEQ02156 737 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms