RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 SEMA6BQ9H3T3 888 aa22.83■■□□□ 1.25
CHRNE-202ENST00000572438 ADD3Q9UEY8 706 aaKnown RBP22.83■■□□□ 1.25
CHRNE-202ENST00000572438 SAMM50Q9Y512 469 aa22.83■■□□□ 1.25
CHRNE-202ENST00000572438 ASTN1O14525 1302 aa22.83■■□□□ 1.25
CHRNE-202ENST00000572438 WDR64B1ANS9 1081 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 ALDH5A1P51649 535 aaPredicted RBP22.82■■□□□ 1.24
CHRNE-202ENST00000572438 KRT31Q15323 416 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 IRF2BP1Q8IU81 584 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 CSGALNACT2Q8N6G5 542 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 CACTINQ8WUQ7 758 aaKnown RBP22.82■■□□□ 1.24
CHRNE-202ENST00000572438 ZBTB39O15060 712 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 EIF3JO75822 258 aaKnown RBP22.82■■□□□ 1.24
CHRNE-202ENST00000572438 CCNE2O96020 404 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 KCNA2P16389 499 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 QARSP47897 775 aaKnown RBP22.82■■□□□ 1.24
CHRNE-202ENST00000572438 LRRC41Q15345 812 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 Q3C1V9 767 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 FILIP1LQ4L180 1135 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 ZNF746Q6NUN9 644 aaPredicted RBP22.82■■□□□ 1.24
CHRNE-202ENST00000572438 C1orf186Q6ZWK4 172 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 GLIS3Q8NEA6 775 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 RDM1Q8NG50 284 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 SENP7Q9BQF6 1050 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 ZHX3Q9H4I2 956 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 NMRK2Q9NPI5 230 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 KCND2Q9NZV8 630 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 SLC45A1Q9Y2W3 748 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 LCTP09848 1927 aa22.82■■□□□ 1.24
CHRNE-202ENST00000572438 SPATA31C2B4DYI2 1134 aa22.81■■□□□ 1.24
CHRNE-202ENST00000572438 TBCAO75347 108 aaKnown RBP22.81■■□□□ 1.24
CHRNE-202ENST00000572438 LYPLA2O95372 231 aa22.81■■□□□ 1.24
CHRNE-202ENST00000572438 EEF1GP26641 437 aaKnown RBP22.81■■□□□ 1.24
CHRNE-202ENST00000572438 FOXR2Q6PJQ5 311 aa22.81■■□□□ 1.24
CHRNE-202ENST00000572438 LRRC8AQ8IWT6 810 aa22.81■■□□□ 1.24
CHRNE-202ENST00000572438 FAM133AQ8N9E0 248 aa22.81■■□□□ 1.24
CHRNE-202ENST00000572438 TBC1D7Q9P0N9 293 aa22.81■■□□□ 1.24
CHRNE-202ENST00000572438 NFASCO94856 1347 aa22.81■■□□□ 1.24
CHRNE-202ENST00000572438 CCL15-CCL14A0A0B4J2E2 113 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 LRRC63Q05C16 580 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 CCL15Q16663 113 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 R3HDMLQ9H3Y0 253 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 MROH8Q9H579 483 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 RTN4Q9NQC3 1192 aaKnown RBP22.8■■□□□ 1.24
CHRNE-202ENST00000572438 COL4A3BPQ9Y5P4 624 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 SOWAHBA6NEL2 793 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 KIF20AO95235 890 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 CYP2C8P10632 490 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 EDNRBP24530 442 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 COPB1P53618 953 aaKnown RBP22.8■■□□□ 1.24
CHRNE-202ENST00000572438 LRMPQ12912 555 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 ARID5BQ14865 1188 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 CCDC150Q8NCX0 1101 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 FGFBP2Q9BYJ0 223 aa22.8■■□□□ 1.24
CHRNE-202ENST00000572438 PDHXO00330 501 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 ZNF500O60304 480 aaPredicted RBP22.79■■□□□ 1.24
CHRNE-202ENST00000572438 GAP43P17677 238 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 ICAM3P32942 547 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 ERVK-9P63128 1117 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 ERVK-24P63145 666 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 MKRN3Q13064 507 aaKnown RBP22.79■■□□□ 1.24
CHRNE-202ENST00000572438 SPECC1LQ69YQ0 1117 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 SFR1Q86XK3 245 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 FAM114A1Q8IWE2 563 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 SHCBP1Q8NEM2 672 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 BRI3BPQ8WY22 251 aa22.79■■□□□ 1.24
CHRNE-202ENST00000572438 MAGEC2Q9UBF1 373 aaPredicted RBP22.79■■□□□ 1.24
CHRNE-202ENST00000572438 DBR1Q9UK59 544 aaKnown RBP22.79■■□□□ 1.24
CHRNE-202ENST00000572438 ARHGEF35A5YM69 484 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 BTBD19C9JJ37 291 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 TEX33O43247 280 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 ZBTB48P10074 688 aaPredicted RBP22.78■■□□□ 1.24
CHRNE-202ENST00000572438 PSMC5P62195 406 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 FSTL1Q12841 308 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 SPRYD7Q5W111 196 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 ANKRD23Q86SG2 305 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 SMAP1Q8IYB5 467 aaPredicted RBP22.78■■□□□ 1.24
CHRNE-202ENST00000572438 TSG101Q99816 390 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 JPH1Q9HDC5 661 aaPredicted RBP22.78■■□□□ 1.24
CHRNE-202ENST00000572438 TAB2Q9NYJ8 693 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 PCDHA10Q9Y5I2 948 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 RSPH10B2B2RC85 870 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 RSPH10BP0C881 870 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 KCTD2Q14681 263 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 PTPN21Q16825 1174 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 CREBRFQ8IUR6 639 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 C4orf19Q8IY42 314 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 SMCR8Q8TEV9 937 aaPredicted RBP22.78■■□□□ 1.24
CHRNE-202ENST00000572438 SCFD1Q8WVM8 642 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 MMP19Q99542 508 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 PYCARDQ9ULZ3 195 aa22.78■■□□□ 1.24
CHRNE-202ENST00000572438 B4DLN1 442 aa22.77■■□□□ 1.24
CHRNE-202ENST00000572438 N4BP3O15049 544 aa22.77■■□□□ 1.24
CHRNE-202ENST00000572438 GUCY2CP25092 1073 aa22.77■■□□□ 1.24
CHRNE-202ENST00000572438 CLCN1P35523 988 aa22.77■■□□□ 1.24
CHRNE-202ENST00000572438 UGCGQ16739 394 aa22.77■■□□□ 1.24
CHRNE-202ENST00000572438 ARMCX5Q6P1M9 558 aa22.77■■□□□ 1.24
CHRNE-202ENST00000572438 ODF2LQ9ULJ1 636 aa22.77■■□□□ 1.24
CHRNE-202ENST00000572438 FAM13AO94988 1023 aa22.76■■□□□ 1.23
CHRNE-202ENST00000572438 FGFR1OPO95684 399 aaKnown RBP22.76■■□□□ 1.23
CHRNE-202ENST00000572438 PBX1P40424 430 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms