RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 LIMCH1Q9UPQ0 1083 aa22.84■■□□□ 1.25
NUP88-204ENST00000572290 MYH7BA7E2Y1 1941 aa22.84■■□□□ 1.25
NUP88-204ENST00000572290 IGKV6D-21A0A0A0MT36 114 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 BACH1O14867 736 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 PBX2P40425 430 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 PLCB4Q15147 1175 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 FAM160B1Q5W0V3 765 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 ZNF746Q6NUN9 644 aaPredicted RBP22.83■■□□□ 1.25
NUP88-204ENST00000572290 TIFAQ96CG3 184 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 KIF2CQ99661 725 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 TTYH1Q9H313 450 aaPredicted RBP22.83■■□□□ 1.25
NUP88-204ENST00000572290 GJB4Q9NTQ9 266 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 TRPC6Q9Y210 931 aa22.83■■□□□ 1.25
NUP88-204ENST00000572290 CCDC194A0A1B0GVG4 234 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 RRN3P2A6NIE6 340 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 MSH4O15457 936 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 BAIAP3O94812 1187 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 INSRRP14616 1297 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 ATP2A2P16615 1042 aaKnown RBP22.82■■□□□ 1.24
NUP88-204ENST00000572290 RBM25P49756 843 aaKnown RBP22.82■■□□□ 1.24
NUP88-204ENST00000572290 SLC26A2P50443 739 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 IGBP1P78318 339 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 KRT76Q01546 638 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 MBTPS1Q14703 1052 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 RAB30Q15771 203 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 TAF2Q6P1X5 1199 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 CNKSR3Q6P9H4 555 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 SMAP1Q8IYB5 467 aaPredicted RBP22.82■■□□□ 1.24
NUP88-204ENST00000572290 MSRAQ9UJ68 235 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 TUBE1Q9UJT0 475 aa22.82■■□□□ 1.24
NUP88-204ENST00000572290 CYP3A7-CYP3A51PA0A087WV96 503 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 MBLAC1A4D2B0 266 aaPredicted RBP22.81■■□□□ 1.24
NUP88-204ENST00000572290 JAK2O60674 1132 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 TDP2O95551 362 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 CTSHP09668 335 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 CYP3A7P24462 503 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 INF2Q27J81 1249 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 Q4G0T1 1027 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 SWSAP1Q6NVH7 229 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 MOXD1Q6UVY6 613 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 RUFY4Q6ZNE9 571 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 CCDC60Q8IWA6 550 aaPredicted RBP22.81■■□□□ 1.24
NUP88-204ENST00000572290 ZNF302Q9NR11 478 aa22.81■■□□□ 1.24
NUP88-204ENST00000572290 POTEB3A0JP26 581 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 ST3GAL1Q11201 340 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 MARCH8Q5T0T0 291 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 PDXDC2PQ6P474 469 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 POTEBQ6S5H4 581 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 RPAINQ86UA6 219 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 PHOSPHO2Q8TCD6 241 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 OXER1Q8TDS5 423 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 GUCD1Q96NT3 240 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 SLC9A7Q96T83 725 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 RIT2Q99578 217 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 PCDHA10Q9Y5I2 948 aa22.8■■□□□ 1.24
NUP88-204ENST00000572290 GAS7O60861 476 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 PSAPP07602 524 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 KCNJ6P48051 423 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 LETM2Q2VYF4 491 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 RSPH3Q86UC2 560 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 SLC5A5Q92911 643 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 ZSCAN31Q96LW9 406 aaPredicted RBP22.79■■□□□ 1.24
NUP88-204ENST00000572290 MBOAT7Q96N66 472 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 TEKT3Q9BXF9 490 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 UPF2Q9HAU5 1272 aaKnown RBP22.79■■□□□ 1.24
NUP88-204ENST00000572290 BRMS1Q9HCU9 246 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 STXBP5LQ9Y2K9 1186 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 SAMM50Q9Y512 469 aa22.79■■□□□ 1.24
NUP88-204ENST00000572290 ABHD14A-ACY1A0A1B0GW23 586 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 WDR64B1ANS9 1081 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 HBP1O60381 514 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 KRT2P35908 639 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 RABGGTBP53611 331 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 IKBKEQ14164 716 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 TCTN1Q2MV58 587 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 FAM26DQ5JW98 314 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 LRCH2Q5VUJ6 765 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 PIK3AP1Q6ZUJ8 805 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 NEK8Q86SG6 692 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 CCDC83Q8IWF9 413 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 ATP8B4Q8TF62 1192 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 ZNF576Q9H609 170 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 DOCK5Q9H7D0 1870 aa22.78■■□□□ 1.24
NUP88-204ENST00000572290 DDX25Q9UHL0 483 aaKnown RBP22.78■■□□□ 1.24
NUP88-204ENST00000572290 EFCAB14O75071 495 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 WDR5P61964 334 aaKnown RBP22.77■■□□□ 1.24
NUP88-204ENST00000572290 TRIM29Q14134 588 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 CKAP2LQ8IYA6 745 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 DBF4BQ8NFT6 615 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 TRAPPC12Q8WVT3 735 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 DNAJB3Q8WWF6 145 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 ZBTB10Q96DT7 871 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 CDX2Q99626 313 aaPredicted RBP22.77■■□□□ 1.24
NUP88-204ENST00000572290 NKX2-4Q9H2Z4 354 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 DISC1Q9NRI5 854 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 GABBR1Q9UBS5 961 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 YBX2Q9Y2T7 364 aaKnown RBP22.77■■□□□ 1.24
NUP88-204ENST00000572290 PCDHA11Q9Y5I1 949 aa22.77■■□□□ 1.24
NUP88-204ENST00000572290 MAFBQ9Y5Q3 323 aaPredicted RBP22.77■■□□□ 1.24
NUP88-204ENST00000572290 TANC1Q9C0D5 1861 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms