RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PAN2Q504Q3 1202 aaKnown RBP22.87■■□□□ 1.25
CCDC40-206ENST00000572083 NLRX1Q86UT6 975 aa22.87■■□□□ 1.25
CCDC40-206ENST00000572083 P2RX5Q93086 422 aa22.87■■□□□ 1.25
CCDC40-206ENST00000572083 AGO3Q9H9G7 860 aaKnown RBP22.87■■□□□ 1.25
CCDC40-206ENST00000572083 ATP9AO75110 1047 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 IGBP1P78318 339 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 NUCB1Q02818 461 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 WTAPQ15007 396 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 MARCH8Q5T0T0 291 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 IER5LQ5T953 404 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 GIMAP8Q8ND71 665 aaPredicted RBP22.86■■□□□ 1.25
CCDC40-206ENST00000572083 CUL5Q93034 780 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 PPP2R3CQ969Q6 453 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 FAM49AQ9H0Q0 323 aaPredicted RBP22.86■■□□□ 1.25
CCDC40-206ENST00000572083 PKD2L1Q9P0L9 805 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 CLEC1BQ9P126 229 aa22.86■■□□□ 1.25
CCDC40-206ENST00000572083 MBLAC1A4D2B0 266 aaPredicted RBP22.85■■□□□ 1.25
CCDC40-206ENST00000572083 TMEM221A6NGB7 291 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 M0R296 226 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 EYA4O95677 639 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 KCNA2P16389 499 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 MRPS6P82932 125 aaKnown RBP22.85■■□□□ 1.25
CCDC40-206ENST00000572083 TRIM67Q6ZTA4 783 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 RBM23Q86U06 439 aaKnown RBP22.85■■□□□ 1.25
CCDC40-206ENST00000572083 CMTR2Q8IYT2 770 aaKnown RBP22.85■■□□□ 1.25
CCDC40-206ENST00000572083 KLHL23Q8NBE8 558 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 SMRP1Q8NCR6 262 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 SPPL3Q8TCT6 385 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 GLG1Q92896 1179 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 PBXIP1Q96AQ6 731 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 ERAP1Q9NZ08 941 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 BARX2Q9UMQ3 279 aaPredicted RBP22.85■■□□□ 1.25
CCDC40-206ENST00000572083 PCDHGC5Q9Y5F6 944 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 MYO15AQ9UKN7 3530 aa22.85■■□□□ 1.25
CCDC40-206ENST00000572083 GSTTP1A0A1W2PQM5 241 aa22.84■■□□□ 1.25
CCDC40-206ENST00000572083 MEIS2O14770 477 aa22.84■■□□□ 1.25
CCDC40-206ENST00000572083 NRIP1P48552 1158 aa22.84■■□□□ 1.25
CCDC40-206ENST00000572083 XRRA1Q6P2D8 792 aa22.84■■□□□ 1.25
CCDC40-206ENST00000572083 EFHBQ8N7U6 833 aa22.84■■□□□ 1.25
CCDC40-206ENST00000572083 POF1BQ8WVV4 589 aa22.84■■□□□ 1.25
CCDC40-206ENST00000572083 RWDD1Q9H446 243 aaPredicted RBP22.84■■□□□ 1.25
CCDC40-206ENST00000572083 TAF6LQ9Y6J9 622 aa22.84■■□□□ 1.25
CCDC40-206ENST00000572083 GLP2RO95838 553 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 CYP21A2P08686 494 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 IBSPP21815 317 aaPredicted RBP22.83■■□□□ 1.25
CCDC40-206ENST00000572083 GATMP50440 423 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 TMEM62Q0P6H9 643 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 BMP8AQ7Z5Y6 402 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 CATIPQ7Z7H3 387 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 RALYLQ86SE5 291 aaKnown RBP22.83■■□□□ 1.25
CCDC40-206ENST00000572083 RTN4RL1Q86UN2 441 aaPredicted RBP22.83■■□□□ 1.25
CCDC40-206ENST00000572083 NPAS4Q8IUM7 802 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 CRIPAKQ8N1N5 446 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 SEPT1Q8WYJ6 367 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 GPRASP2Q96D09 838 aa22.83■■□□□ 1.25
CCDC40-206ENST00000572083 PLXNA4Q9HCM2 1894 aa22.83■■□□□ 1.24
CCDC40-206ENST00000572083 CFAP54Q96N23 3096 aa22.83■■□□□ 1.24
CCDC40-206ENST00000572083 LOC730098B7Z3J9 87 aa22.82■■□□□ 1.24
CCDC40-206ENST00000572083 PIK3CDO00329 1044 aa22.82■■□□□ 1.24
CCDC40-206ENST00000572083 IGHDP01880 384 aa22.82■■□□□ 1.24
CCDC40-206ENST00000572083 PTPN5P54829 565 aa22.82■■□□□ 1.24
CCDC40-206ENST00000572083 COASYQ13057 564 aa22.82■■□□□ 1.24
CCDC40-206ENST00000572083 SART3Q15020 963 aaKnown RBP22.82■■□□□ 1.24
CCDC40-206ENST00000572083 NAALADL2Q58DX5 795 aa22.82■■□□□ 1.24
CCDC40-206ENST00000572083 SUGP1Q8IWZ8 645 aaKnown RBP22.82■■□□□ 1.24
CCDC40-206ENST00000572083 RRP36Q96EU6 259 aaKnown RBP22.82■■□□□ 1.24
CCDC40-206ENST00000572083 USP15Q9Y4E8 981 aaPredicted RBP22.82■■□□□ 1.24
CCDC40-206ENST00000572083 KMT2EQ8IZD2 1858 aa22.81■■□□□ 1.24
CCDC40-206ENST00000572083 ITGB5P18084 799 aa22.81■■□□□ 1.24
CCDC40-206ENST00000572083 ZXDAP98168 799 aa22.81■■□□□ 1.24
CCDC40-206ENST00000572083 CDHR1Q96JP9 859 aa22.81■■□□□ 1.24
CCDC40-206ENST00000572083 MYL10Q9BUA6 226 aa22.81■■□□□ 1.24
CCDC40-206ENST00000572083 FTHL17Q9BXU8 183 aa22.81■■□□□ 1.24
CCDC40-206ENST00000572083 SMARCAD1Q9H4L7 1026 aa22.81■■□□□ 1.24
CCDC40-206ENST00000572083 PADI3Q9ULW8 664 aa22.81■■□□□ 1.24
CCDC40-206ENST00000572083 U3KPZ7 1027 aaPredicted RBP22.81■■□□□ 1.24
CCDC40-206ENST00000572083 E7EWF7 191 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 PPFIA3O75145 1194 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 SCG2P13521 617 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 INSRRP14616 1297 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 PTH1RQ03431 593 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 PAK2Q13177 524 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 IER5Q5VY09 327 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 SNX27Q96L92 541 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 SPZ1Q9BXG8 430 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 SEC63Q9UGP8 760 aaKnown RBP22.8■■□□□ 1.24
CCDC40-206ENST00000572083 TRPV2Q9Y5S1 764 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 LOXHD1Q8IVV2 1947 aa22.8■■□□□ 1.24
CCDC40-206ENST00000572083 M0QZ92 97 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 STAG3L1P0CL83 205 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 ANTXR2P58335 489 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 RBM10P98175 930 aaKnown RBP22.79■■□□□ 1.24
CCDC40-206ENST00000572083 TCF15Q12870 199 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 MTMR1Q13613 665 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 CBX2Q14781 532 aaPredicted RBP22.79■■□□□ 1.24
CCDC40-206ENST00000572083 UBE2SQ16763 222 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 NCOA7Q8NI08 942 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 TRAPPC12Q8WVT3 735 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 RPGRIP1Q96KN7 1286 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 PCYT2Q99447 389 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms