RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 DGKIO75912 1065 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 CD52P31358 61 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 GATMP50440 423 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 BTG3Q14201 252 aaPredicted RBP22.08■■□□□ 1.13
NUP88-203ENST00000572019 TTC22Q5TAA0 569 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 CRIPAKQ8N1N5 446 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 PCYT2Q99447 389 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 SPZ1Q9BXG8 430 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 LY9Q9HBG7 655 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 PLAGL2Q9UPG8 496 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 PCDHGC5Q9Y5F6 944 aa22.08■■□□□ 1.13
NUP88-203ENST00000572019 U3KPZ7 1027 aaPredicted RBP22.08■■□□□ 1.13
NUP88-203ENST00000572019 FNDC1Q4ZHG4 1894 aaPredicted RBP22.08■■□□□ 1.13
NUP88-203ENST00000572019 hCG_1642624A0A1W2PR95 340 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 ERICH2A1L162 156 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 MMP1P03956 469 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 RXRAP19793 462 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 CHMLP26374 656 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 IGBP1P78318 339 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 TMEM62Q0P6H9 643 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 UBE2SQ16763 222 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 TAF2Q6P1X5 1199 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 CATIPQ7Z7H3 387 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 RALYLQ86SE5 291 aaKnown RBP22.07■■□□□ 1.12
NUP88-203ENST00000572019 ZNF654Q8IZM8 581 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 SRBD1Q8N5C6 995 aaKnown RBP22.07■■□□□ 1.12
NUP88-203ENST00000572019 NCOA7Q8NI08 942 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 FAM49AQ9H0Q0 323 aaPredicted RBP22.07■■□□□ 1.12
NUP88-203ENST00000572019 LMAN2LQ9H0V9 348 aa22.07■■□□□ 1.12
NUP88-203ENST00000572019 EVPLQ92817 2033 aa22.06■■□□□ 1.12
NUP88-203ENST00000572019 ITGB1P05556 798 aa22.06■■□□□ 1.12
NUP88-203ENST00000572019 NLRX1Q86UT6 975 aa22.06■■□□□ 1.12
NUP88-203ENST00000572019 RAB11FIP4Q86YS3 637 aa22.06■■□□□ 1.12
NUP88-203ENST00000572019 RNF135Q8IUD6 432 aa22.06■■□□□ 1.12
NUP88-203ENST00000572019 TRAPPC12Q8WVT3 735 aa22.06■■□□□ 1.12
NUP88-203ENST00000572019 PHOX2BQ99453 314 aa22.06■■□□□ 1.12
NUP88-203ENST00000572019 FAM50BQ9Y247 325 aa22.06■■□□□ 1.12
NUP88-203ENST00000572019 MRPS6P82932 125 aaKnown RBP22.05■■□□□ 1.12
NUP88-203ENST00000572019 ADAM15Q13444 863 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 SMAD4Q13485 552 aaKnown RBP22.05■■□□□ 1.12
NUP88-203ENST00000572019 AAMPQ13685 434 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 PAN2Q504Q3 1202 aaKnown RBP22.05■■□□□ 1.12
NUP88-203ENST00000572019 TSHZ1Q6ZSZ6 1077 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 SEPT1Q8WYJ6 367 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 GPRASP2Q96D09 838 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 RRP36Q96EU6 259 aaKnown RBP22.05■■□□□ 1.12
NUP88-203ENST00000572019 MSLNLQ96KJ4 702 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 ERAP1Q9NZ08 941 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 CLEC1BQ9P126 229 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 UBIAD1Q9Y5Z9 338 aa22.05■■□□□ 1.12
NUP88-203ENST00000572019 INSRRP14616 1297 aa22.04■■□□□ 1.12
NUP88-203ENST00000572019 HERC4Q5GLZ8 1057 aaPredicted RBP22.04■■□□□ 1.12
NUP88-203ENST00000572019 XRRA1Q6P2D8 792 aa22.04■■□□□ 1.12
NUP88-203ENST00000572019 SPPL3Q8TCT6 385 aa22.04■■□□□ 1.12
NUP88-203ENST00000572019 GLG1Q92896 1179 aa22.04■■□□□ 1.12
NUP88-203ENST00000572019 CUL5Q93034 780 aa22.04■■□□□ 1.12
NUP88-203ENST00000572019 CD207Q9UJ71 328 aa22.04■■□□□ 1.12
NUP88-203ENST00000572019 KMT2EQ8IZD2 1858 aa22.04■■□□□ 1.12
NUP88-203ENST00000572019 NCK2O43639 380 aa22.03■■□□□ 1.12
NUP88-203ENST00000572019 GLP2RO95838 553 aa22.03■■□□□ 1.12
NUP88-203ENST00000572019 RBM10P98175 930 aaKnown RBP22.03■■□□□ 1.12
NUP88-203ENST00000572019 SART3Q15020 963 aaKnown RBP22.03■■□□□ 1.12
NUP88-203ENST00000572019 KLHL23Q8NBE8 558 aa22.03■■□□□ 1.12
NUP88-203ENST00000572019 TMX1Q9H3N1 280 aa22.03■■□□□ 1.12
NUP88-203ENST00000572019 RWDD3Q9Y3V2 267 aa22.03■■□□□ 1.12
NUP88-203ENST00000572019 STXBP3O00186 592 aa22.02■■□□□ 1.12
NUP88-203ENST00000572019 SGSM2O43147 1006 aa22.02■■□□□ 1.12
NUP88-203ENST00000572019 MTMR1Q13613 665 aa22.02■■□□□ 1.12
NUP88-203ENST00000572019 GIMAP8Q8ND71 665 aaPredicted RBP22.02■■□□□ 1.12
NUP88-203ENST00000572019 CTCFLQ8NI51 663 aaPredicted RBP22.02■■□□□ 1.12
NUP88-203ENST00000572019 CYP2W1Q8TAV3 490 aa22.02■■□□□ 1.12
NUP88-203ENST00000572019 PLVAPQ9BX97 442 aa22.02■■□□□ 1.12
NUP88-203ENST00000572019 PSTPIP2Q9H939 334 aa22.02■■□□□ 1.12
NUP88-203ENST00000572019 HCSTQ9UBK5 93 aa22.02■■□□□ 1.12
NUP88-203ENST00000572019 ZDBF2Q9HCK1 2354 aa22.01■■□□□ 1.11
NUP88-203ENST00000572019 DDAH1O94760 285 aa22.01■■□□□ 1.11
NUP88-203ENST00000572019 IBSPP21815 317 aaPredicted RBP22.01■■□□□ 1.11
NUP88-203ENST00000572019 NDUFV1P49821 464 aa22.01■■□□□ 1.11
NUP88-203ENST00000572019 RSPH3Q86UC2 560 aa22.01■■□□□ 1.11
NUP88-203ENST00000572019 CMTR2Q8IYT2 770 aaKnown RBP22.01■■□□□ 1.11
NUP88-203ENST00000572019 MAP3K14Q99558 947 aa22.01■■□□□ 1.11
NUP88-203ENST00000572019 SMARCAD1Q9H4L7 1026 aa22.01■■□□□ 1.11
NUP88-203ENST00000572019 JADE2Q9NQC1 790 aa22.01■■□□□ 1.11
NUP88-203ENST00000572019 SEC63Q9UGP8 760 aaKnown RBP22.01■■□□□ 1.11
NUP88-203ENST00000572019 PADI3Q9ULW8 664 aa22.01■■□□□ 1.11
NUP88-203ENST00000572019 BARX2Q9UMQ3 279 aaPredicted RBP22.01■■□□□ 1.11
NUP88-203ENST00000572019 RBM8AQ9Y5S9 174 aaKnown RBP22.01■■□□□ 1.11
NUP88-203ENST00000572019 TMEM266Q2M3C6 531 aa22■■□□□ 1.11
NUP88-203ENST00000572019 IER5LQ5T953 404 aa22■■□□□ 1.11
NUP88-203ENST00000572019 RBM23Q86U06 439 aaKnown RBP22■■□□□ 1.11
NUP88-203ENST00000572019 CCDC82Q8N4S0 544 aa22■■□□□ 1.11
NUP88-203ENST00000572019 POF1BQ8WVV4 589 aa22■■□□□ 1.11
NUP88-203ENST00000572019 MAP4K1Q92918 833 aa22■■□□□ 1.11
NUP88-203ENST00000572019 P2RX5Q93086 422 aa22■■□□□ 1.11
NUP88-203ENST00000572019 PGBD1Q96JS3 809 aa22■■□□□ 1.11
NUP88-203ENST00000572019 UPF3BQ9BZI7 483 aaKnown RBP22■■□□□ 1.11
NUP88-203ENST00000572019 PCDHA6Q9UN73 950 aa22■■□□□ 1.11
NUP88-203ENST00000572019 PCDHA8Q9Y5H6 950 aa22■■□□□ 1.11
NUP88-203ENST00000572019 TRPV2Q9Y5S1 764 aa22■■□□□ 1.11
NUP88-203ENST00000572019 SH2B2O14492 632 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms