RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 DLX2Q07687 328 aaPredicted RBP21.81■■□□□ 1.08
SCARF1-204ENST00000570902 NAALADL2Q58DX5 795 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 TTC22Q5TAA0 569 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 ZNF654Q8IZM8 581 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 IGDCC4Q8TDY8 1250 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 TNPO1Q92973 898 aaKnown RBP21.81■■□□□ 1.08
SCARF1-204ENST00000570902 P2RX5Q93086 422 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 MFSD14AQ96MC6 490 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 FTHL17Q9BXU8 183 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 IGFLR1Q9H665 355 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 CD207Q9UJ71 328 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 SQORQ9Y6N5 450 aa21.81■■□□□ 1.08
SCARF1-204ENST00000570902 ATG2AQ2TAZ0 1938 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 GSTTP1A0A1W2PQM5 241 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 MRE11P49959 708 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 MRPS6P82932 125 aaKnown RBP21.8■■□□□ 1.08
SCARF1-204ENST00000570902 NHLH1Q02575 133 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 MTMR1Q13613 665 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 HERC4Q5GLZ8 1057 aaPredicted RBP21.8■■□□□ 1.08
SCARF1-204ENST00000570902 MARCH8Q5T0T0 291 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 IER5Q5VY09 327 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 CMTR2Q8IYT2 770 aaKnown RBP21.8■■□□□ 1.08
SCARF1-204ENST00000570902 FBXL18Q96ME1 805 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 PSTPIP2Q9H939 334 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 PLAGL2Q9UPG8 496 aa21.8■■□□□ 1.08
SCARF1-204ENST00000570902 RRN3P2A6NIE6 340 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 M0QZ92 97 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 STXBP3O00186 592 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 MAFGO15525 162 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 TBX10O75333 385 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 GSPT1P15170 499 aaKnown RBP21.79■■□□□ 1.08
SCARF1-204ENST00000570902 ITGB5P18084 799 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 ANTXR2P58335 489 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 HFE2Q6ZVN8 426 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 ALG13Q9NP73 1137 aaKnown RBP21.79■■□□□ 1.08
SCARF1-204ENST00000570902 MUTYHQ9UIF7 546 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 TTC3P53804 2025 aa21.79■■□□□ 1.08
SCARF1-204ENST00000570902 CHMLP26374 656 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 GTF2F1P35269 517 aaKnown RBP eCLIP21.78■■□□□ 1.08
SCARF1-204ENST00000570902 NDUFV1P49821 464 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 IGBP1P78318 339 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 ADAM15Q13444 863 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 CASC1Q6TDU7 716 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 RNF135Q8IUD6 432 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 NPAS4Q8IUM7 802 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 MB21D2Q8IYB1 491 aaPredicted RBP21.78■■□□□ 1.08
SCARF1-204ENST00000570902 MTA3Q9BTC8 594 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 MYL10Q9BUA6 226 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 AGO3Q9H9G7 860 aaKnown RBP21.78■■□□□ 1.08
SCARF1-204ENST00000570902 LY9Q9HBG7 655 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 UBIAD1Q9Y5Z9 338 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 MRPL42Q9Y6G3 142 aaKnown RBP21.78■■□□□ 1.08
SCARF1-204ENST00000570902 TAF6LQ9Y6J9 622 aa21.78■■□□□ 1.08
SCARF1-204ENST00000570902 SPDYE3A6NKU9 549 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 CSPG5O95196 566 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 STAG3L1P0CL83 205 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 CD52P31358 61 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 TMTC2Q8N394 836 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 EXOC6Q8TAG9 804 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 LINC01599Q8WXQ3 324 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 FAM49AQ9H0Q0 323 aaPredicted RBP21.77■■□□□ 1.08
SCARF1-204ENST00000570902 AZI2Q9H6S1 392 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 MYO7AQ13402 2215 aa21.77■■□□□ 1.08
SCARF1-204ENST00000570902 LINC01565O15544 149 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 EYA4O95677 639 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 INSRRP14616 1297 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 CAMK1Q14012 370 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 CRIPAKQ8N1N5 446 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 MSLNLQ96KJ4 702 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 JPH1Q9HDC5 661 aaPredicted RBP21.76■■□□□ 1.07
SCARF1-204ENST00000570902 JADE2Q9NQC1 790 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 PKD2L1Q9P0L9 805 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 TRPV2Q9Y5S1 764 aa21.76■■□□□ 1.07
SCARF1-204ENST00000570902 C5orf42Q9H799 3197 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 ITGB1P05556 798 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 PAK2Q13177 524 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 NFXL1Q6ZNB6 911 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 FAM43BQ6ZT52 329 aaPredicted RBP21.75■■□□□ 1.07
SCARF1-204ENST00000570902 SRBD1Q8N5C6 995 aaKnown RBP21.75■■□□□ 1.07
SCARF1-204ENST00000570902 EFHBQ8N7U6 833 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 SPPL3Q8TCT6 385 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 EDAQ92838 391 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 TRPC6Q9Y210 931 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 PCDHA2Q9Y5H9 948 aa21.75■■□□□ 1.07
SCARF1-204ENST00000570902 CCDC69A6NI79 296 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 SGSM2O43147 1006 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 PLEKHA8P1O95397 391 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 CALM1P0DP23 149 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 CALM2P0DP24 149 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 CALM3P0DP25 149 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 SCG2P13521 617 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 PDE4AP27815 886 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 COASYQ13057 564 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 RTN4RL1Q86UN2 441 aaPredicted RBP21.74■■□□□ 1.07
SCARF1-204ENST00000570902 KLHL23Q8NBE8 558 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 MAP4K1Q92918 833 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 SLC9A2Q9UBY0 812 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 LRFN2Q9ULH4 789 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 PADI3Q9ULW8 664 aa21.74■■□□□ 1.07
SCARF1-204ENST00000570902 IGSF9BQ9UPX0 1349 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms