RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 ZNF296Q8WUU4 475 aaPredicted RBP20.24■□□□□ 0.83
SPNS2-202ENST00000570641 LARP4BQ92615 738 aaKnown RBP20.24■□□□□ 0.83
SPNS2-202ENST00000570641 LXNQ9BS40 222 aa20.24■□□□□ 0.83
SPNS2-202ENST00000570641 LRRC27Q9C0I9 530 aa20.24■□□□□ 0.83
SPNS2-202ENST00000570641 BCAS3Q9H6U6 928 aa20.24■□□□□ 0.83
SPNS2-202ENST00000570641 ZSWIM4Q9H7M6 989 aa20.24■□□□□ 0.83
SPNS2-202ENST00000570641 BLOC1S4Q9NUP1 217 aa20.24■□□□□ 0.83
SPNS2-202ENST00000570641 SORBS3O60504 671 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 ATG7O95352 703 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 MYL1P05976 194 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 CYP2C19P33261 490 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 ADCYAP1R1P41586 468 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 AFMP43652 599 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 PRMT2P55345 433 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 PSMC5P62195 406 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 MDM2Q00987 491 aaPredicted RBP20.23■□□□□ 0.83
SPNS2-202ENST00000570641 LAMC2Q13753 1193 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 ABHD15Q6UXT9 468 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 CKAP2LQ8IYA6 745 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 BANK1Q8NDB2 785 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 SEPT1Q8WYJ6 367 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 NACC1Q96RE7 527 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 KBTBD4Q9NVX7 518 aa20.23■□□□□ 0.83
SPNS2-202ENST00000570641 SYCE3A1L190 88 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 NOP56O00567 594 aaKnown RBP20.22■□□□□ 0.83
SPNS2-202ENST00000570641 FOXN1O15353 648 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 GTPBP6O43824 516 aaPredicted RBP20.22■□□□□ 0.83
SPNS2-202ENST00000570641 SMC2O95347 1197 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 LYPLA2O95372 231 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 ZNF865P0CJ78 1059 aaPredicted RBP20.22■□□□□ 0.83
SPNS2-202ENST00000570641 CAP1Q01518 475 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 PNOCQ13519 176 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 MCM6Q14566 821 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 CCDC144BQ3MJ40 725 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 DUSP28Q4G0W2 176 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 KCNK18Q7Z418 384 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 LRRC15Q8TF66 581 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 TRIB2Q92519 343 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 ATP6V0A1Q93050 837 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 WBP1LQ9NX94 342 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 KIAA1468Q9P260 1216 aa20.22■□□□□ 0.83
SPNS2-202ENST00000570641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.21■□□□□ 0.83
SPNS2-202ENST00000570641 E9PMD0 336 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 BACH1O14867 736 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 EYA4O95677 639 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 PRR29P0C7W0 189 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 PLA2G4BP0C869 781 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 ZNF445P59923 1031 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 TNFAIP2Q03169 654 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 ARHGAP1Q07960 439 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 PRAMEF19Q5SWL8 479 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 C4orf19Q8IY42 314 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 GRAMD1CQ8IYS0 662 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 COPS5Q92905 334 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 EMID1Q96A84 441 aaPredicted RBP20.21■□□□□ 0.83
SPNS2-202ENST00000570641 SPATA33Q96N06 139 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 GABBR1Q9UBS5 961 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 FAM184BQ9ULE4 1060 aa20.21■□□□□ 0.83
SPNS2-202ENST00000570641 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.2■□□□□ 0.82
SPNS2-202ENST00000570641 GSTTP1A0A1W2PQM5 241 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 XRCC6P12956 609 aaKnown RBP eCLIP20.2■□□□□ 0.82
SPNS2-202ENST00000570641 SMPD1P17405 629 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 DHX8Q14562 1220 aaKnown RBP20.2■□□□□ 0.82
SPNS2-202ENST00000570641 FAM160B1Q5W0V3 765 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 SWSAP1Q6NVH7 229 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 SASS6Q6UVJ0 657 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 RAET1EQ8TD07 263 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 STAMQ92783 540 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 SMARCE1Q969G3 411 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 GPR20Q99678 358 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 ZNF302Q9NR11 478 aa20.2■□□□□ 0.82
SPNS2-202ENST00000570641 IGKV6D-21A0A0A0MT36 114 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 SSBP05455 408 aaKnown RBP eCLIP20.19■□□□□ 0.82
SPNS2-202ENST00000570641 PSMC6P62333 389 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 DPYDQ12882 1025 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 UGCGQ16739 394 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 CCDC60Q8IWA6 550 aaPredicted RBP20.19■□□□□ 0.82
SPNS2-202ENST00000570641 SYT2Q8N9I0 419 aaPredicted RBP20.19■□□□□ 0.82
SPNS2-202ENST00000570641 OR6J1Q8NGC5 347 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 MTRQ99707 1265 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 C7orf25Q9BPX7 421 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 WRAP73Q9P2S5 460 aaPredicted RBP20.19■□□□□ 0.82
SPNS2-202ENST00000570641 TUBE1Q9UJT0 475 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 DBR1Q9UK59 544 aaKnown RBP20.19■□□□□ 0.82
SPNS2-202ENST00000570641 TELO2Q9Y4R8 837 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 PCDHA5Q9Y5H7 936 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 IGSF9BQ9UPX0 1349 aa20.19■□□□□ 0.82
SPNS2-202ENST00000570641 ARID2Q68CP9 1835 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 ADCY3O60266 1144 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 CYBAP13498 195 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 AKR1A1P14550 325 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 TCF7P36402 384 aaPredicted RBP20.18■□□□□ 0.82
SPNS2-202ENST00000570641 HSDL1Q3SXM5 330 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 TMEM63BQ5T3F8 832 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 GJC2Q5T442 439 aaPredicted RBP20.18■□□□□ 0.82
SPNS2-202ENST00000570641 LRSAM1Q6UWE0 723 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 PPTC7Q8NI37 304 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 PXYLP1Q8TE99 480 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 AFAP1L1Q8TED9 768 aa20.18■□□□□ 0.82
SPNS2-202ENST00000570641 PIGOQ8TEQ8 1089 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms