RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CSRNP2Q9H175 543 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 MLXIPQ9HAP2 919 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 AGO4Q9HCK5 861 aaKnown RBP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 SLC9A2Q9UBY0 812 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 CCDC39Q9UFE4 941 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 NRBP1Q9UHY1 535 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 PCDHA7Q9UN72 937 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 GABRQQ9UN88 632 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 DDX49Q9Y6V7 483 aaKnown RBP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 NFASCO94856 1347 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 SPATA31C2B4DYI2 1134 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 BACH1O14867 736 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 ADCY3O60266 1144 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 SORBS3O60504 671 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 DKC1O60832 514 aaKnown RBP eCLIP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 KINO60870 393 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 GGPS1O95749 300 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 GH1P01241 217 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 HSPA1AP0DMV8 641 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 HSPA1BP0DMV9 641 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 AKR1A1P14550 325 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 CNGA1P29973 690 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 ICAM3P32942 547 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 CCT6AP40227 531 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 PPP2R5CQ13362 524 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 ACVR2BQ13705 512 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 NFKBIBQ15653 356 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 CCL14Q16627 93 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 BRDTQ58F21 947 aaPredicted RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 ZNF746Q6NUN9 644 aaPredicted RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 MIS18BP1Q6P0N0 1132 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 METTL7BQ6UX53 244 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 CABP7Q86V35 215 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 DHX37Q8IY37 1157 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 SMAP1Q8IYB5 467 aaPredicted RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 RDM1Q8NG50 284 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 NEK9Q8TD19 979 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 TRIB2Q92519 343 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 HAS1Q92839 578 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 GJA10Q969M2 543 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 CLIC6Q96NY7 704 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 MTMR9Q96QG7 549 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 SENP7Q9BQF6 1050 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 NT5C3AQ9H0P0 336 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 UNC45AQ9H3U1 944 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 AZI2Q9H6S1 392 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 SPC25Q9HBM1 224 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 HOOK1Q9UJC3 728 aaKnown RBP7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 GJD2Q9UKL4 321 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 FAM184BQ9ULE4 1060 aa7.39□□□□□ -1.23
CTDNEP1-204ENST00000570484 LRRC37A2A6NM11 1700 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 BAZ2BQ9UIF8 2168 aaKnown RBP7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 PP2D1A8MPX8 630 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 SLC26A4O43511 780 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 PSMD10O75832 226 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 RGS20O76081 388 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 SNAI1O95863 264 aaPredicted RBP7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 PSAPP07602 524 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 HSPA8P11142 646 aaKnown RBP7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 ELNP15502 786 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 PFKFB1P16118 471 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 KCNA2P16389 499 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 CMA1P23946 247 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 GRK4P32298 578 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 ADCYAP1R1P41586 468 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 STAT6P42226 847 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 SYKP43405 635 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 TNFAIP2Q03169 654 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 FAM160A1Q05DH4 1040 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 ITGB3BPQ13352 177 aaPredicted RBP7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 LY6KQ17RY6 165 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 SKOR2Q2VWA4 1001 aaPredicted RBP7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 CCDC144BQ3MJ40 725 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 SLC9C1Q4G0N8 1177 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 SPECC1Q5M775 1068 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 FAM160B1Q5W0V3 765 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 RESP18Q5W5W9 173 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 CYFIP1Q7L576 1253 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 OTOP1Q7RTM1 612 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 TLK2Q86UE8 772 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 CEP57L1Q8IYX8 460 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 DNAJC5GQ8N7S2 189 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 C4orf32Q8N8J7 132 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 IGSF22Q8N9C0 903 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 OR6J1Q8NGC5 347 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 ATP6V0A1Q93050 837 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 SPATA33Q96N06 139 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 AP5M1Q9H0R1 490 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 DISC1Q9NRI5 854 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 DDX19AQ9NUU7 478 aaKnown RBP7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 FLRT1Q9NZU1 646 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 VAV3Q9UKW4 847 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 PTCH2Q9Y6C5 1203 aa7.38□□□□□ -1.23
CTDNEP1-204ENST00000570484 MYH15Q9Y2K3 1946 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 A0A1B0GVL5 298 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 FOXN1O15353 648 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 EDIL3O43854 480 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 MSCO60682 206 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 GADD45BO75293 160 aaPredicted RBP7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 FARP2O94887 1054 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms