RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CYP46A1Q9Y6A2 500 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 LOXHD1Q8IVV2 1947 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 RRN3P2A6NIE6 340 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 ACTR2P61160 394 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 GRIK4Q16099 956 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 MARCH8Q5T0T0 291 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 BICD2Q8TD16 824 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 SEPT8Q92599 483 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 GLG1Q92896 1179 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 TUBE1Q9UJT0 475 aa19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PRRC2BQ5JSZ5 2229 aaKnown RBP19.47■□□□□ 0.71
MAP1LC3B-208ENST00000570189 RALGAPA2Q2PPJ7 1873 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 FAM86B1E9PN63 330 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 DHX15O43143 795 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 ARHGEF15O94989 841 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 FAM86B2P0C5J1 330 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 CIITAP33076 1130 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 HTRA4P83105 476 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 SETQ01105 290 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 AKAP17AQ02040 695 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 MGAT3Q09327 533 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 FAM43BQ6ZT52 329 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PHKBQ93100 1093 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 COL25A1Q9BXS0 654 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 AZI2Q9H6S1 392 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PKD2L1Q9P0L9 805 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 SQORQ9Y6N5 450 aa19.46■□□□□ 0.71
MAP1LC3B-208ENST00000570189 NLRC5Q86WI3 1866 aa19.45■□□□□ 0.7
MAP1LC3B-208ENST00000570189 SPTBN5Q9NRC6 3674 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3B-208ENST00000570189 AMHP03971 560 aa19.45■□□□□ 0.7
MAP1LC3B-208ENST00000570189 JAKMIP3Q5VZ66 844 aa19.45■□□□□ 0.7
MAP1LC3B-208ENST00000570189 RSPH3Q86UC2 560 aa19.45■□□□□ 0.7
MAP1LC3B-208ENST00000570189 SP7Q8TDD2 431 aaPredicted RBP19.45■□□□□ 0.7
MAP1LC3B-208ENST00000570189 INSL6Q9Y581 213 aa19.45■□□□□ 0.7
MAP1LC3B-208ENST00000570189 TTC3P53804 2025 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 CHRNA1P02708 482 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 INSRRP14616 1297 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 ZNF76P36508 570 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 STAT5BP51692 787 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 ABHD15Q6UXT9 468 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 RUFY4Q6ZNE9 571 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 PLA2G4DQ86XP0 818 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 ATXN2LQ8WWM7 1075 aaKnown RBP19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 IL17RAQ96F46 866 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 ZBED2Q9BTP6 218 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 TBC1D22BQ9NU19 505 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 LMCD1Q9NZU5 365 aa19.44■□□□□ 0.7
MAP1LC3B-208ENST00000570189 LCHNA4D1U4 455 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 EPOPA6NHQ4 379 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 IPO5O00410 1097 aaKnown RBP19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 ADAMTS3O15072 1205 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 CCNE2O96020 404 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 CTSHP09668 335 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 IGFBP4P22692 258 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 MARK3P27448 753 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 ANAPC15P60006 121 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 ERVK-21P61565 698 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 PLCB4Q15147 1175 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 SYMPKQ92797 1274 aaKnown RBP19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 TOP1MTQ969P6 601 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 LENG9Q96B70 501 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 SLC26A6Q9BXS9 759 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 IFIH1Q9BYX4 1025 aaKnown RBP19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 OSBPL7Q9BZF2 842 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 PCDHA2Q9Y5H9 948 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 MTCH2Q9Y6C9 303 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 COL1A2P08123 1366 aa19.43■□□□□ 0.7
MAP1LC3B-208ENST00000570189 EVPLQ92817 2033 aa19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 LINC01553A4QN01 128 aa19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 LPXNO60711 386 aa19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 ZNF746Q6NUN9 644 aaPredicted RBP19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 SMAP1Q8IYB5 467 aaPredicted RBP19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 TRIM22Q8IYM9 498 aa19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 TGS1Q96RS0 853 aaKnown RBP19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 C22orf23Q9BZE7 217 aa19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 NCOA5Q9HCD5 579 aaKnown RBP19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 THEGQ9P2T0 379 aa19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 KDM3AQ9Y4C1 1321 aa19.42■□□□□ 0.7
MAP1LC3B-208ENST00000570189 SMIM35A0A1B0GVV1 85 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 POTEB3A0JP26 581 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 GTPBP6O43824 516 aaPredicted RBP19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 DEXIO95424 95 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 USP11P51784 963 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 CCT2P78371 535 aaKnown RBP19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 TJAP1Q5JTD0 557 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 FBXO47Q5MNV8 452 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 FAM160B1Q5W0V3 765 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 POTEBQ6S5H4 581 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 TMCO2Q7Z6W1 182 aaPredicted RBP19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 DAGLBQ8NCG7 672 aa19.41■□□□□ 0.7
MAP1LC3B-208ENST00000570189 TTC28Q96AY4 2481 aa19.4■□□□□ 0.7
MAP1LC3B-208ENST00000570189 EDIL3O43854 480 aa19.4■□□□□ 0.7
MAP1LC3B-208ENST00000570189 HBP1O60381 514 aa19.4■□□□□ 0.7
MAP1LC3B-208ENST00000570189 MRPS6P82932 125 aaKnown RBP19.4■□□□□ 0.7
MAP1LC3B-208ENST00000570189 KRT76Q01546 638 aa19.4■□□□□ 0.7
MAP1LC3B-208ENST00000570189 SSRP1Q08945 709 aaKnown RBP19.4■□□□□ 0.7
MAP1LC3B-208ENST00000570189 LPIN1Q14693 890 aa19.4■□□□□ 0.7
MAP1LC3B-208ENST00000570189 IER5Q5VY09 327 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms