RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 LYPLA2O95372 231 aa26.32■■□□□ 1.8
RAB40C-212ENST00000569575 CMA1P23946 247 aa26.32■■□□□ 1.8
RAB40C-212ENST00000569575 QARSP47897 775 aaKnown RBP26.32■■□□□ 1.8
RAB40C-212ENST00000569575 GJA8P48165 433 aa26.32■■□□□ 1.8
RAB40C-212ENST00000569575 STAT5BP51692 787 aa26.32■■□□□ 1.8
RAB40C-212ENST00000569575 EIF2AK1Q9BQI3 630 aaKnown RBP26.32■■□□□ 1.8
RAB40C-212ENST00000569575 ZSWIM4Q9H7M6 989 aa26.32■■□□□ 1.8
RAB40C-212ENST00000569575 ZNF302Q9NR11 478 aa26.32■■□□□ 1.8
RAB40C-212ENST00000569575 ERAP1Q9NZ08 941 aa26.32■■□□□ 1.8
RAB40C-212ENST00000569575 CCDC39Q9UFE4 941 aa26.32■■□□□ 1.8
RAB40C-212ENST00000569575 POTEFA5A3E0 1075 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 EML1O00423 815 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 BACH1O14867 736 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 PGK1P00558 417 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 LRRC41Q15345 812 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 HYIQ5T013 277 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 CCSAPQ6IQ19 270 aaPredicted RBP26.31■■□□□ 1.8
RAB40C-212ENST00000569575 C4orf19Q8IY42 314 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 U2AF1L4Q8WU68 220 aaKnown RBP26.31■■□□□ 1.8
RAB40C-212ENST00000569575 CALML4Q96GE6 196 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 FAM167AQ96KS9 214 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 FAM13BQ9NYF5 915 aa26.31■■□□□ 1.8
RAB40C-212ENST00000569575 FRMPD3Q5JV73 1810 aa26.3■■□□□ 1.8
RAB40C-212ENST00000569575 MYH9P35579 1960 aaKnown RBP26.3■■□□□ 1.8
RAB40C-212ENST00000569575 KBTBD13C9JR72 458 aa26.3■■□□□ 1.8
RAB40C-212ENST00000569575 SP4Q02446 784 aa26.3■■□□□ 1.8
RAB40C-212ENST00000569575 SWSAP1Q6NVH7 229 aa26.3■■□□□ 1.8
RAB40C-212ENST00000569575 UIMC1Q96RL1 719 aa26.3■■□□□ 1.8
RAB40C-212ENST00000569575 MTG1Q9BT17 334 aaPredicted RBP26.3■■□□□ 1.8
RAB40C-212ENST00000569575 PPME1Q9Y570 386 aa26.3■■□□□ 1.8
RAB40C-212ENST00000569575 SLITRK3O94933 977 aa26.29■■□□□ 1.8
RAB40C-212ENST00000569575 LGALS2P05162 132 aa26.29■■□□□ 1.8
RAB40C-212ENST00000569575 PURAQ00577 322 aaKnown RBP26.29■■□□□ 1.8
RAB40C-212ENST00000569575 RESP18Q5W5W9 173 aa26.29■■□□□ 1.8
RAB40C-212ENST00000569575 SNX29Q8TEQ0 813 aa26.29■■□□□ 1.8
RAB40C-212ENST00000569575 GLG1Q92896 1179 aa26.29■■□□□ 1.8
RAB40C-212ENST00000569575 LENG1Q96BZ8 264 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-212ENST00000569575 C16orf70Q9BSU1 422 aa26.29■■□□□ 1.8
RAB40C-212ENST00000569575 IGSF9BQ9UPX0 1349 aa26.29■■□□□ 1.8
RAB40C-212ENST00000569575 H3BRB1 525 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 F2P00734 622 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 CCT6AP40227 531 aaKnown RBP26.28■■□□□ 1.8
RAB40C-212ENST00000569575 KCNA10Q16322 511 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 PDXDC2PQ6P474 469 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 OTUD6AQ7L8S5 288 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 CABP7Q86V35 215 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 CATSPER3Q86XQ3 398 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 CCDC60Q8IWA6 550 aaPredicted RBP26.28■■□□□ 1.8
RAB40C-212ENST00000569575 CDK5RAP3Q96JB5 506 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 CLIC6Q96NY7 704 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 NACC1Q96RE7 527 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 TUT1Q9H6E5 874 aaKnown RBP26.28■■□□□ 1.8
RAB40C-212ENST00000569575 NRBP2Q9NSY0 501 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 GABBR1Q9UBS5 961 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 PHF24Q9UPV7 400 aa26.28■■□□□ 1.8
RAB40C-212ENST00000569575 WDR81Q562E7 1941 aa26.27■■□□□ 1.8
RAB40C-212ENST00000569575 FAM237AA0A1B0GTK4 181 aa26.27■■□□□ 1.8
RAB40C-212ENST00000569575 TFRCP02786 760 aaKnown RBP26.27■■□□□ 1.8
RAB40C-212ENST00000569575 XKR3Q5GH77 459 aa26.27■■□□□ 1.8
RAB40C-212ENST00000569575 EXOC8Q8IYI6 725 aa26.27■■□□□ 1.8
RAB40C-212ENST00000569575 BBXQ8WY36 941 aaPredicted RBP26.27■■□□□ 1.8
RAB40C-212ENST00000569575 SYMPKQ92797 1274 aaKnown RBP26.27■■□□□ 1.8
RAB40C-212ENST00000569575 SORBS3O60504 671 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 ASGR1P07306 291 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 SPATA31C1P0DKV0 1188 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 PTMSP20962 102 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 ACLYP53396 1101 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 BEX3Q00994 111 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 GRIN1Q05586 938 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 SHC4Q6S5L8 630 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 CCDC73Q6ZRK6 1079 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 TPH2Q8IWU9 490 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 DYDC2Q96IM9 177 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 CHAMP1Q96JM3 812 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 GLT1D1Q96MS3 346 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 PCYT2Q99447 389 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 LXNQ9BS40 222 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 MMTAG2Q9BU76 263 aaKnown RBP26.26■■□□□ 1.79
RAB40C-212ENST00000569575 CUEDC2Q9H467 287 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 GDPD2Q9HCC8 539 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 ANKEF1Q9NU02 776 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 USP25Q9UHP3 1055 aa26.26■■□□□ 1.79
RAB40C-212ENST00000569575 HAS3O00219 553 aa26.25■■□□□ 1.79
RAB40C-212ENST00000569575 HBP1O60381 514 aa26.25■■□□□ 1.79
RAB40C-212ENST00000569575 MYL3P08590 195 aa26.25■■□□□ 1.79
RAB40C-212ENST00000569575 UBE2HP62256 183 aa26.25■■□□□ 1.79
RAB40C-212ENST00000569575 UTP14CQ5TAP6 766 aaKnown RBP26.25■■□□□ 1.79
RAB40C-212ENST00000569575 ATP8B4Q8TF62 1192 aa26.25■■□□□ 1.79
RAB40C-212ENST00000569575 STK17AQ9UEE5 414 aa26.25■■□□□ 1.79
RAB40C-212ENST00000569575 LOXHD1Q8IVV2 1947 aa26.24■■□□□ 1.79
RAB40C-212ENST00000569575 MYADML2A6NDP7 307 aa26.24■■□□□ 1.79
RAB40C-212ENST00000569575 PTPN11Q06124 597 aaPredicted RBP26.24■■□□□ 1.79
RAB40C-212ENST00000569575 RASSF8Q8NHQ8 419 aa26.24■■□□□ 1.79
RAB40C-212ENST00000569575 MRPS27Q92552 414 aaKnown RBP26.24■■□□□ 1.79
RAB40C-212ENST00000569575 EPSTI1Q96J88 318 aa26.24■■□□□ 1.79
RAB40C-212ENST00000569575 NIFKQ9BYG3 293 aaKnown RBP26.24■■□□□ 1.79
RAB40C-212ENST00000569575 RGL1Q9NZL6 768 aa26.24■■□□□ 1.79
RAB40C-212ENST00000569575 DBR1Q9UK59 544 aaKnown RBP26.24■■□□□ 1.79
RAB40C-212ENST00000569575 DNM3Q9UQ16 869 aa26.24■■□□□ 1.79
RAB40C-212ENST00000569575 COL1A2P08123 1366 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms