RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 PPP1R12BO60237 982 aaPredicted RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 USO1O60763 962 aaKnown RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 EYA4O95677 639 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 SSBP05455 408 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDH13-213ENST00000569454 BCRP11274 1271 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 H2AFXP16104 143 aaPredicted RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 CYP11B2P19099 503 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 MCM3P25205 808 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 RPL13P26373 211 aaKnown RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 ANXA13P27216 316 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 CAP2P40123 477 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 EPS15P42566 896 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 SLC12A3P55017 1021 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 ERVK-24P63145 666 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 GHRHRQ02643 423 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 CKAP4Q07065 602 aaKnown RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 SPIRE1Q08AE8 756 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 GOLGA8FQ08AF8 430 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 GOLGA8DPQ0D2H9 430 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 FSTL1Q12841 308 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 PPP2R5CQ13362 524 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 ALCAMQ13740 583 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 SPA17Q15506 151 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 NFIL3Q16649 462 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 BMT2Q1RMZ1 405 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 CCDC40Q4G0X9 1142 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 HERC4Q5GLZ8 1057 aaPredicted RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDH13-213ENST00000569454 DYMQ7RTS9 669 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 SRGAP1Q7Z6B7 1085 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 KIAA1328Q86T90 577 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 MCF2L2Q86YR7 1114 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 HS6ST3Q8IZP7 471 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 SYT2Q8N9I0 419 aaPredicted RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 NEK11Q8NG66 645 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 GOLGA5Q8TBA6 731 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 JDP2Q8WYK2 163 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 LENG9Q96B70 501 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 CCDC42Q96M95 316 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 WDR24Q96S15 920 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 GBP3Q9H0R5 595 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 METTL14Q9HCE5 456 aaKnown RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 LZTFL1Q9NQ48 299 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 OLFML3Q9NRN5 406 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 PIM2Q9P1W9 311 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 CEP72Q9P209 647 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 HCSTQ9UBK5 93 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 ODF2LQ9ULJ1 636 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 MYO6Q9UM54 1294 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 TRAF3IP3Q9Y228 551 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 LOXHD1Q8IVV2 1947 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 FRMPD4Q14CM0 1322 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 IGLV3-22A0A075B6J6 115 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 A0A1W2PRG0 241 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 CCDC151A5D8V7 595 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TCP10L2B9ZVM9 353 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TRAF5O00463 557 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 PDXKO00764 312 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 ERLIN1O75477 346 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 ICAM1P05362 532 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 POLD1P28340 1107 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 VAV2P52735 878 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 KIF5AQ12840 1032 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 BMS1Q14692 1282 aaKnown RBP6.32□□□□□ -1.4
CDH13-213ENST00000569454 MTF1Q14872 753 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 BRD3Q15059 726 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 USH1GQ495M9 461 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 CEP55Q53EZ4 464 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 ZNF569Q5MCW4 686 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 CCDC122Q5T0U0 273 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 LRCH2Q5VUJ6 765 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 DCAF15Q66K64 600 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 CIAPIN1Q6FI81 312 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 NCAPH2Q6IBW4 605 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 XRRA1Q6P2D8 792 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TMCO3Q6UWJ1 677 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 RSRC2Q7L4I2 434 aaKnown RBP6.32□□□□□ -1.4
CDH13-213ENST00000569454 CACNA2D4Q7Z3S7 1137 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 KCNK18Q7Z418 384 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 FRMD5Q7Z6J6 570 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TRIM59Q8IWR1 403 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 KRT222Q8N1A0 295 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 CCDC155Q8N6L0 562 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TRIM58Q8NG06 486 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TSC1Q92574 1164 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 RUBCNQ92622 972 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 SLC5A5Q92911 643 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 JAKMIP2Q96AA8 810 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 ZBED3Q96IU2 234 aaPredicted RBP6.32□□□□□ -1.4
CDH13-213ENST00000569454 ALS2CR12Q96Q35 445 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 RIT2Q99578 217 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 MKNK1Q9BUB5 465 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TIPINQ9BVW5 301 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 CARD6Q9BX69 1037 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 KIAA1683Q9H0B3 1180 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TAOK3Q9H2K8 898 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 DEF6Q9H4E7 631 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 VEZTQ9HBM0 779 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms