RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 RAB23Q9ULC3 237 aa7.89□□□□□ -1.15
HERPUD1-217ENST00000569429 CFAP46Q8IYW2 2715 aa7.89□□□□□ -1.15
HERPUD1-217ENST00000569429 MYH7P12883 1935 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 C17orf102A2RUQ5 167 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 HIDE1A8MVS5 230 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 B4DLN1 442 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 TMEM232C9JQI7 657 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 TREHO43280 583 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 SRGAP3O43295 1099 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 KCNK5O95279 499 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 ZNF286BP0CG31 522 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 MAGEA9P43362 315 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 MRPL12P52815 198 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 PLCB3Q01970 1234 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 MTX1Q13505 466 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 LY6KQ17RY6 165 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 PAN2Q504Q3 1202 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 RARS2Q5T160 578 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 NPAS4Q8IUM7 802 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 CELF5Q8N6W0 485 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 PPTC7Q8NI37 304 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 STAG1Q8WVM7 1258 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 NXPE3Q969Y0 559 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 TCF25Q9BQ70 676 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 BCO2Q9BYV7 579 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 ARHGEF3Q9NR81 526 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 TMEM260Q9NX78 707 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 CLIP2Q9UDT6 1046 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 TEX15Q9BXT5 2789 aa7.88□□□□□ -1.15
HERPUD1-217ENST00000569429 MYO9AB2RTY4 2548 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 CYP2D7A0A087X1C5 515 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 IGKV6D-41A0A0C4DH26 115 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 EIF4E1BA6NMX2 242 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 LRRN2O75325 713 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 PPFIA4O75335 1185 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 STAG3L1P0CL83 205 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 TNNI3KQ59H18 835 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 CCDC149Q6ZUS6 474 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 CHST3Q7LGC8 479 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 AMOTL1Q8IY63 956 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 SLC44A3Q8N4M1 653 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 GLIS3Q8NEA6 775 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 GPR152Q8TDT2 470 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 MRPS27Q92552 414 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 BBC3Q96PG8 261 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 LSM14BQ9BX40 385 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 FOXQ1Q9C009 403 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 DZANK1Q9NVP4 752 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 PUF60Q9UHX1 559 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 CCPG1Q9ULG6 757 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 FPGT-TNNI3KV9GXZ4 949 aa7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 MTCL1Q9Y4B5 1905 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-217ENST00000569429 PTPDC1A2A3K4 754 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 NFIBO00712 420 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 CHRNA1P02708 482 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 ICAM1P05362 532 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 GHRP10912 638 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 RASA1P20936 1047 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 APOBRQ0VD83 1088 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 G3BP1Q13283 466 aaKnown RBP eCLIP7.86□□□□□ -1.156e-10■□□□□ 10.8
HERPUD1-217ENST00000569429 LAMC2Q13753 1193 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 LPIN1Q14693 890 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 SLFN13Q68D06 897 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 DCLRE1AQ6PJP8 1040 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 RTN4RL1Q86UN2 441 aaPredicted RBP7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 THNSL1Q8IYQ7 743 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 LCORLQ8N3X6 602 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 C12orf76Q8N812 135 aaPredicted RBP7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 LINC01599Q8WXQ3 324 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 SHDQ96IW2 340 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 OSBPL6Q9BZF3 934 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 RNPEPQ9H4A4 650 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 ANTXR1Q9H6X2 564 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 ENTPD7Q9NQZ7 604 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 SLC2A4RGQ9NR83 387 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 DDX41Q9UJV9 622 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 GPSM3Q9Y4H4 160 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 ABCA12Q86UK0 2595 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 MYH6P13533 1939 aa7.86□□□□□ -1.15
HERPUD1-217ENST00000569429 ANKRD17O75179 2603 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 CLASP2O75122 1294 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 CALML3P27482 149 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 RPS6P62753 249 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 C19orf57Q0VDD7 668 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 LPAL2Q16609 132 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 SPOUT1Q5T280 376 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 SLC30A10Q6XR72 485 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 RNF207Q6ZRF8 634 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 MRPL43Q8N983 215 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 COLGALT1Q8NBJ5 622 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 RSAD2Q8WXG1 361 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 GMCL1Q96IK5 515 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 C16orf70Q9BSU1 422 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 MYL10Q9BUA6 226 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 DDX23Q9BUQ8 820 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 FTHL17Q9BXU8 183 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 CCDC8Q9H0W5 538 aaPredicted RBP7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 PRMT8Q9NR22 394 aaPredicted RBP7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 PRR12Q9ULL5 1215 aa7.85□□□□□ -1.15
HERPUD1-217ENST00000569429 DOPEY2Q9Y3R5 2298 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms