RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 BMP8BP34820 402 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 THPOP40225 353 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 SWSAP1Q6NVH7 229 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 C16orf59Q7L2K0 433 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 KRT25Q7Z3Z0 450 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 CKAP2LQ8IYA6 745 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 ZSCAN31Q96LW9 406 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 TBC1D32Q96NH3 1257 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 PPP1R16BQ96T49 567 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 PCYT2Q99447 389 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 BACH2Q9BYV9 841 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 AZI2Q9H6S1 392 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 ZNF215Q9UL58 517 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 KAT6AQ92794 2004 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 DLL1O00548 723 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 MSH4O15457 936 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 MAFGO15525 162 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 SLC37A4O43826 429 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 GAS7O60861 476 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 IBSPP21815 317 aaPredicted RBP10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 STAT5BP51692 787 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 TMEM62Q0P6H9 643 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 PPFIA1Q13136 1202 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 PPIGQ13427 754 aaKnown RBP eCLIP10.22□□□□□ -0.776e-8■□□□□ 10.3
GTF3C1-210ENST00000569394 BFSP2Q13515 415 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 GNL2Q13823 731 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 ZNF618Q5T7W0 954 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 LRCH2Q5VUJ6 765 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 Q7L0L9 218 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 DIS3L2Q8IYB7 885 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 SLC17A8Q8NDX2 589 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 LMBR1Q8WVP7 490 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 CRYGNQ8WXF5 182 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 DHX38Q92620 1227 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 C8orf76Q96K31 380 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 CTAGE1Q96RT6 745 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 FAM49AQ9H0Q0 323 aaPredicted RBP10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 SMARCAD1Q9H4L7 1026 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 BRMS1Q9HCU9 246 aa10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 DDX25Q9UHL0 483 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-210ENST00000569394 M0R2N6 131 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 DHX15O43143 795 aaKnown RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 PPP1R37O75864 691 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 FGBP02675 491 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 MMP1P03956 469 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 IQCF3P0C7M6 154 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 CKBP12277 381 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 HOXD8P13378 290 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 INSRRP14616 1297 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 USP11P51784 963 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 SETQ01105 290 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 PTPN11Q06124 597 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 PLCB4Q15147 1175 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 GRIK4Q16099 956 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 TMEM240Q5SV17 173 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 MCTP2Q6DN12 878 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 FAM109BQ6ICB4 259 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 GALNT17Q6IS24 598 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 MIS18BP1Q6P0N0 1132 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 PDXDC2PQ6P474 469 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 RUFY4Q6ZNE9 571 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 TMCO2Q7Z6W1 182 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 NEK8Q86SG6 692 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 CCDC60Q8IWA6 550 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 DAGLBQ8NCG7 672 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 LENG9Q96B70 501 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 TMX3Q96JJ7 454 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 SH2D3AQ9BRG2 576 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 OSBPL7Q9BZF2 842 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 UNC45AQ9H3U1 944 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 IL23AQ9NPF7 189 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 ZNF302Q9NR11 478 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 ERAP1Q9NZ08 941 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 CXXC1Q9P0U4 656 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 GABBR1Q9UBS5 961 aa10.21□□□□□ -0.77
GTF3C1-210ENST00000569394 NFASCO94856 1347 aa10.21□□□□□ -0.78
GTF3C1-210ENST00000569394 POTEB3A0JP26 581 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 WNT7AO00755 349 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 RABGGTBP53611 331 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 SAFBQ15424 915 aaKnown RBP eCLIP10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 FAM160B1Q5W0V3 765 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 MCTP1Q6DN14 999 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 POTEBQ6S5H4 581 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 ABHD15Q6UXT9 468 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 LRRC8DQ7L1W4 858 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 NIPA1Q7RTP0 329 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 MIER3Q7Z3K6 550 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 SESTD1Q86VW0 696 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 BANK1Q8NDB2 785 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 FBXO22Q8NEZ5 403 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 DNAJB3Q8WWF6 145 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 TEKT3Q9BXF9 490 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 SEZ6LQ9BYH1 1024 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 GINS2Q9Y248 185 aa10.2□□□□□ -0.78
GTF3C1-210ENST00000569394 TMEM150BA6NC51 233 aa10.19□□□□□ -0.78
GTF3C1-210ENST00000569394 KIF28PB7ZC32 967 aa10.19□□□□□ -0.78
GTF3C1-210ENST00000569394 MAP3K13O43283 966 aa10.19□□□□□ -0.78
GTF3C1-210ENST00000569394 PSAPP07602 524 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms