RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 ZCWPW2Q504Y3 356 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 CRTC2Q53ET0 693 aaPredicted RBP7.05□□□□□ -1.28
KARS-211ENST00000569298 TTC22Q5TAA0 569 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 SYDE2Q5VT97 1194 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 ATL3Q6DD88 541 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 TWF2Q6IBS0 349 aaKnown RBP7.05□□□□□ -1.28
KARS-211ENST00000569298 HIBCHQ6NVY1 386 aaPredicted RBP7.05□□□□□ -1.28
KARS-211ENST00000569298 LVRNQ6Q4G3 990 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 CCNI2Q6ZMN8 369 aaPredicted RBP7.05□□□□□ -1.28
KARS-211ENST00000569298 UNC13DQ70J99 1090 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 WAPLQ7Z5K2 1190 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 CABP7Q86V35 215 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 BRSK2Q8IWQ3 736 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 SCUBE1Q8IWY4 988 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 CACNA2D3Q8IZS8 1091 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 ARL6IP6Q8N6S5 226 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 LILRB1Q8NHL6 650 aaPredicted RBP7.05□□□□□ -1.28
KARS-211ENST00000569298 AGAP11Q8TF27 550 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 DHX58Q96C10 678 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 CYFIP2Q96F07 1278 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 MED30Q96HR3 178 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 VPS50Q96JG6 964 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 CDHR1Q96JP9 859 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 C8orf48Q96LL4 319 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 ZSCAN31Q96LW9 406 aaPredicted RBP7.05□□□□□ -1.28
KARS-211ENST00000569298 SYT15Q9BQS2 421 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 LNPKQ9C0E8 428 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 GBA3Q9H227 469 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 PIH1D3Q9NQM4 214 aaKnown RBP7.05□□□□□ -1.28
KARS-211ENST00000569298 INIPQ9NRY2 104 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 STAP2Q9UGK3 403 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 NOD1Q9Y239 953 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 PCDHGB3Q9Y5G1 929 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 KIF13AQ9H1H9 1805 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 PLEKHG1Q9ULL1 1385 aa7.05□□□□□ -1.28
KARS-211ENST00000569298 DIP2BQ9P265 1576 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 CASKIN1Q8WXD9 1431 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 A0A0J9YVX5 310 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 SMIM31A0A1B0GVY4 71 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 CTAGE9A4FU28 777 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 E7EVH7 732 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 IFIT3O14879 490 aaKnown RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 IKBKBO14920 756 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 FANCGO15287 622 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 TEX28O15482 410 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 MAN1A2O60476 641 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 SNX2O60749 519 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 HIP1RO75146 1068 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 SERPINB7O75635 380 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 LMNAP02545 664 aaKnown RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 ITGA2BP08514 1039 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 GNAZP19086 355 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 M6PRP20645 277 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 ATP5DP30049 168 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 HSPA9P38646 679 aaKnown RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 HALP42357 657 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 ATP1A2P50993 1020 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 GPC3P51654 580 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 HPCAP84074 193 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 ATP11AP98196 1134 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 GUCY1B3Q02153 619 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 CYLC2Q14093 348 aaPredicted RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 OXLD1Q5BKU9 147 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 GKAP1Q5VSY0 366 aaPredicted RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 KIAA1841Q6NSI8 718 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 EMBQ6PCB8 327 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 TUBA3EQ6PEY2 450 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 TTC23LQ6PF05 361 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 CYP26C1Q6V0L0 522 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 DHX40Q8IX18 779 aaKnown RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 RHOT2Q8IXI1 618 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 ANKRD36BP1Q96IX9 119 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 COG3Q96JB2 828 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 IFT74Q96LB3 600 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 CCDC42Q96M95 316 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 GBP5Q96PP8 586 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 PANX2Q96RD6 677 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 PRPF18Q99633 342 aaKnown RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 SPATA16Q9BXB7 569 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 EPC1Q9H2F5 836 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 QTRT2Q9H974 415 aaKnown RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 C12orf10Q9HB07 376 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 EURLQ9NYK6 297 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 CHPF2Q9P2E5 772 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 TBC1D30Q9Y2I9 924 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 LRCH1Q9Y2L9 728 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 NFE2L3Q9Y4A8 694 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 GPC6Q9Y625 555 aaPredicted RBP7.04□□□□□ -1.28
KARS-211ENST00000569298 IVNS1ABPQ9Y6Y0 642 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 EFCAB6Q5THR3 1501 aa7.04□□□□□ -1.28
KARS-211ENST00000569298 PDS5AQ29RF7 1337 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ASXL2Q76L83 1435 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 LAMC1P11047 1609 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 A0A088AWK7 358 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 CCT8L1PA6NM43 557 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 APAF1O14727 1248 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ASAP2O43150 1006 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 NDUFB5O43674 189 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms