RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 TMPRSS13Q9BYE2 586 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 USP44Q9H0E7 712 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 SIL1Q9H173 461 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 ABCF2Q9UG63 623 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 PCDHGB7Q9Y5F8 929 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 GBF1Q92538 1859 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 CHD7Q9P2D1 2997 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 GPR75-ASB3A0A0A6YYF3 556 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 MEGF11A6BM72 1044 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 PF4P02776 101 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 DRD2P14416 443 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 FOSL2P15408 326 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 ADORA1P30542 326 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 MAPK4P31152 587 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 HOXA7P31268 230 aaPredicted RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 RGS2P41220 211 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 CDK8P49336 464 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 RHBDL3P58872 404 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 HERVK_113P62684 666 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 ERVK-24P63145 666 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 RACK1P63244 317 aaKnown RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 MECOMQ03112 1051 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 RASGRF1Q13972 1273 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 PLA2G4EQ3MJ16 856 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 EXOSC6Q5RKV6 272 aaKnown RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 C9orf50Q5SZB4 431 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 GPR142Q7Z601 462 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 CCAR1Q8IX12 1150 aaKnown RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 TMEM74Q96NL1 305 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 UBL7Q96S82 380 aaPredicted RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 WDR18Q9BV38 432 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 EMILIN2Q9BXX0 1053 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 PORCNQ9H237 461 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 TTYH1Q9H313 450 aaPredicted RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 AS3MTQ9HBK9 375 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 METTL5Q9NRN9 209 aaKnown RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 TMOD4Q9NZQ9 345 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 RBPJLQ9UBG7 517 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 PRKAG2Q9UGJ0 569 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 RAPGEFL1Q9UHV5 662 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 CYP8B1Q9UNU6 501 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 MROH7-TTC4A0A0A0MT08 1334 aa6.93□□□□□ -1.3
CDH13-211ENST00000568770 TCF20Q9UGU0 1960 aaKnown RBP6.93□□□□□ -1.3
CDH13-211ENST00000568770 CIAO1O76071 339 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 BACE1P56817 501 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 RTP1P59025 263 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 JAG1P78504 1218 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 SMAD3P84022 425 aaKnown RBP6.92□□□□□ -1.3
CDH13-211ENST00000568770 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 RAD51AP2Q09MP3 1159 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 SEPT6Q14141 434 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 SPTY2D1Q68D10 685 aaPredicted RBP6.92□□□□□ -1.3
CDH13-211ENST00000568770 HS2ST1Q7LGA3 356 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 PLEKHH3Q7Z736 793 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 NT5DC4Q86YG4 428 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 RELL1Q8IUW5 271 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 TMEM151AQ8N4L1 468 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 ZNF384Q8TF68 577 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 LPAR1Q92633 364 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 GAL3ST3Q96A11 431 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 MEGF10Q96KG7 1140 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 RHOVQ96L33 236 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 NACC1Q96RE7 527 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 APBA2Q99767 749 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 PAGR1Q9BTK6 254 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 PRDM5Q9NQX1 630 aaPredicted RBP6.92□□□□□ -1.3
CDH13-211ENST00000568770 FLRT1Q9NZU1 646 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 DDX20Q9UHI6 824 aaKnown RBP6.92□□□□□ -1.3
CDH13-211ENST00000568770 PPP1R9AQ9ULJ8 1098 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 ATP11BQ9Y2G3 1177 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 SAMM50Q9Y512 469 aa6.92□□□□□ -1.3
CDH13-211ENST00000568770 MYH8P13535 1937 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 C19orf81C9J6K1 198 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 DNM1LO00429 736 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 TCF3P15923 654 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 GARTP22102 1010 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 CNGA1P29973 690 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 TIMM10P62072 90 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 RPS26P62854 115 aaKnown RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 NRG1Q02297 640 aaPredicted RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 SHROOM1Q2M3G4 852 aaPredicted RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 GJC2Q5T442 439 aaPredicted RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 BNC2Q6ZN30 1099 aaPredicted RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 Q6ZS46 218 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 BADQ92934 168 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 EDC3Q96F86 508 aaKnown RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 CWC22Q9HCG8 908 aaKnown RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 ADAMTS1Q9UHI8 967 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 HERC5Q9UII4 1024 aaKnown RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 PCDHGC5Q9Y5F6 944 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 COL11A1P12107 1806 aaPredicted RBP6.91□□□□□ -1.3
CDH13-211ENST00000568770 PARP14Q460N5 1801 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 ZNF236Q9UL36 1845 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 PTPRCP08575 1304 aa6.91□□□□□ -1.3
CDH13-211ENST00000568770 PDS5AQ29RF7 1337 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms