RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MBTPS2O43462 519 aa18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 STAG3L1P0CL83 205 aa18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 IRS1P35568 1242 aa18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 MRPS6P82932 125 aaKnown RBP18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 MTMR1Q13613 665 aa18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 HERC4Q5GLZ8 1057 aaPredicted RBP18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 ALYREFQ86V81 257 aaKnown RBP18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 PSTPIP2Q9H939 334 aa18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 CDY2AQ9Y6F7 541 aa18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 KAT6AQ92794 2004 aa18.08■□□□□ 0.48
HERPUD1-215ENST00000568676 BAZ2BQ9UIF8 2168 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 GSTTP1A0A1W2PQM5 241 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 SPDYE3A6NKU9 549 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 CALM1P0DP23 149 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 CALM2P0DP24 149 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 CALM3P0DP25 149 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 CHMLP26374 656 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 PTH1RQ03431 593 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 MARCH8Q5T0T0 291 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 CASC1Q6TDU7 716 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 DNAJB3Q8WWF6 145 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 PIBF1Q8WXW3 757 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 CD207Q9UJ71 328 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 PLAGL2Q9UPG8 496 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 UBIAD1Q9Y5Z9 338 aa18.07■□□□□ 0.48
HERPUD1-215ENST00000568676 DOCK5Q9H7D0 1870 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 ATP9AO75110 1047 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 ITGB5P18084 799 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 ANTXR2P58335 489 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 ADAM15Q13444 863 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 CRIPAKQ8N1N5 446 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 AZI2Q9H6S1 392 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 LY9Q9HBG7 655 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 JADE2Q9NQC1 790 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 TELO2Q9Y4R8 837 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 TTC3P53804 2025 aa18.06■□□□□ 0.48
HERPUD1-215ENST00000568676 SGSM2O43147 1006 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 TBX10O75333 385 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 EYA4O95677 639 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 MARK3P27448 753 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 NHLH1Q02575 133 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 DLX2Q07687 328 aaPredicted RBP18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 PKN1Q16512 942 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 NME8Q8N427 588 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 MAP4K1Q92918 833 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 TMEM87BQ96K49 555 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 FBXL18Q96ME1 805 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 JPH1Q9HDC5 661 aaPredicted RBP18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 SUPT16HQ9Y5B9 1047 aaKnown RBP18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 TRPV2Q9Y5S1 764 aa18.05■□□□□ 0.48
HERPUD1-215ENST00000568676 KDM3AQ9Y4C1 1321 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 CCDC69A6NI79 296 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 STXBP3O00186 592 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 INSRRP14616 1297 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 CD52P31358 61 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 NDUFV1P49821 464 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 MRE11P49959 708 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 SLC26A2P50443 739 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 PLPPR4Q7Z2D5 763 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 BMP8AQ7Z5Y6 402 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 RNF135Q8IUD6 432 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 EFHBQ8N7U6 833 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 MSLNLQ96KJ4 702 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 IGFLR1Q9H665 355 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 AGO3Q9H9G7 860 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 ALG13Q9NP73 1137 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 SLC9A2Q9UBY0 812 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 PCDHA2Q9Y5H9 948 aa18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 MRPL42Q9Y6G3 142 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-215ENST00000568676 IGSF9BQ9UPX0 1349 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 RBAK-RBAKDNI3L0D1 243 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 MCM5P33992 734 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 LIFRP42702 1097 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 COASYQ13057 564 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 PAK2Q13177 524 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 CAMK1Q14012 370 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 ODR4Q5SWX8 454 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 NFXL1Q6ZNB6 911 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 HFE2Q6ZVN8 426 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 SRBD1Q8N5C6 995 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 EDAQ92838 391 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 PRRX2Q99811 253 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 PCDHA6Q9UN73 950 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 TRPC6Q9Y210 931 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 PCDHA8Q9Y5H6 950 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 TAF6LQ9Y6J9 622 aa18.03■□□□□ 0.48
HERPUD1-215ENST00000568676 NFASCO94856 1347 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 SMIM35A0A1B0GVV1 85 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 PRC1O43663 620 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 ITGB1P05556 798 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 SCG2P13521 617 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 IGBP1P78318 339 aa18.02■□□□□ 0.48
HERPUD1-215ENST00000568676 UBE3AQ05086 875 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms