RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 TAF2Q6P1X5 1199 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 ABHD15Q6UXT9 468 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 MYLIPQ8WY64 445 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 LENG9Q96B70 501 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 SLKQ9H2G2 1235 aaPredicted RBP33.41■■■□□ 2.94
RAB40C-211ENST00000568586 AZI2Q9H6S1 392 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 TBC1D22BQ9NU19 505 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 EYSQ5T1H1 3165 aa33.41■■■□□ 2.94
RAB40C-211ENST00000568586 STK36Q9NRP7 1315 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 CDKL5O76039 1030 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 MARK3P27448 753 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 SLC26A2P50443 739 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 AK2P54819 239 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 WDR5P61964 334 aaKnown RBP33.4■■■□□ 2.94
RAB40C-211ENST00000568586 MKRN4PQ13434 485 aaPredicted RBP33.4■■■□□ 2.94
RAB40C-211ENST00000568586 GRIK4Q16099 956 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 HERC6Q8IVU3 1022 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 C22orf23Q9BZE7 217 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 NKX2-4Q9H2Z4 354 aa33.4■■■□□ 2.94
RAB40C-211ENST00000568586 RRN3P2A6NIE6 340 aa33.39■■■□□ 2.94
RAB40C-211ENST00000568586 STAT5BP51692 787 aa33.39■■■□□ 2.94
RAB40C-211ENST00000568586 TNPO1Q92973 898 aaKnown RBP33.39■■■□□ 2.94
RAB40C-211ENST00000568586 SLC28A3Q9HAS3 691 aa33.39■■■□□ 2.94
RAB40C-211ENST00000568586 KAT6AQ92794 2004 aa33.39■■■□□ 2.94
RAB40C-211ENST00000568586 GBF1Q92538 1859 aa33.39■■■□□ 2.94
RAB40C-211ENST00000568586 IKBKEQ14164 716 aa33.38■■■□□ 2.93
RAB40C-211ENST00000568586 PLCB4Q15147 1175 aa33.38■■■□□ 2.93
RAB40C-211ENST00000568586 PLEKHG4Q58EX7 1191 aa33.38■■■□□ 2.93
RAB40C-211ENST00000568586 ZNF577Q9BSK1 485 aa33.38■■■□□ 2.93
RAB40C-211ENST00000568586 INSRRP14616 1297 aa33.37■■■□□ 2.93
RAB40C-211ENST00000568586 MYOGP15173 224 aa33.37■■■□□ 2.93
RAB40C-211ENST00000568586 BLIDQ8IZY5 108 aa33.37■■■□□ 2.93
RAB40C-211ENST00000568586 AIFM3Q96NN9 605 aa33.37■■■□□ 2.93
RAB40C-211ENST00000568586 TUBE1Q9UJT0 475 aa33.37■■■□□ 2.93
RAB40C-211ENST00000568586 KCNJ6P48051 423 aa33.36■■■□□ 2.93
RAB40C-211ENST00000568586 PRR16Q569H4 304 aa33.36■■■□□ 2.93
RAB40C-211ENST00000568586 ZNF746Q6NUN9 644 aaPredicted RBP33.36■■■□□ 2.93
RAB40C-211ENST00000568586 RUFY4Q6ZNE9 571 aa33.36■■■□□ 2.93
RAB40C-211ENST00000568586 DBF4BQ8NFT6 615 aa33.36■■■□□ 2.93
RAB40C-211ENST00000568586 CTDNEP1O95476 244 aa33.35■■■□□ 2.93
RAB40C-211ENST00000568586 RPLP2P05387 115 aaKnown RBP33.35■■■□□ 2.93
RAB40C-211ENST00000568586 FOSL2P15408 326 aa33.35■■■□□ 2.93
RAB40C-211ENST00000568586 TRANK1O15050 2925 aa33.35■■■□□ 2.93
RAB40C-211ENST00000568586 PRUNE2Q8WUY3 3088 aa33.34■■■□□ 2.93
RAB40C-211ENST00000568586 CYP3A7-CYP3A51PA0A087WV96 503 aa33.34■■■□□ 2.93
RAB40C-211ENST00000568586 CYP3A7P24462 503 aa33.34■■■□□ 2.93
RAB40C-211ENST00000568586 SMAP1Q8IYB5 467 aaPredicted RBP33.34■■■□□ 2.93
RAB40C-211ENST00000568586 TBCKQ8TEA7 893 aa33.34■■■□□ 2.93
RAB40C-211ENST00000568586 OSBPL7Q9BZF2 842 aa33.34■■■□□ 2.93
RAB40C-211ENST00000568586 MYO9BQ13459 2157 aa33.34■■■□□ 2.93
RAB40C-211ENST00000568586 UNC80Q8N2C7 3258 aa33.33■■■□□ 2.93
RAB40C-211ENST00000568586 KIF28PB7ZC32 967 aa33.33■■■□□ 2.93
RAB40C-211ENST00000568586 DDX39AO00148 427 aaKnown RBP33.33■■■□□ 2.93
RAB40C-211ENST00000568586 CHRNA1P02708 482 aa33.33■■■□□ 2.93
RAB40C-211ENST00000568586 DEFB103AP81534 67 aa33.33■■■□□ 2.93
RAB40C-211ENST00000568586 KRT76Q01546 638 aa33.33■■■□□ 2.93
RAB40C-211ENST00000568586 MIS18BP1Q6P0N0 1132 aa33.33■■■□□ 2.93
RAB40C-211ENST00000568586 CCDC60Q8IWA6 550 aaPredicted RBP33.33■■■□□ 2.93
RAB40C-211ENST00000568586 PHF20Q9BVI0 1012 aa33.33■■■□□ 2.93
RAB40C-211ENST00000568586 POTEB3A0JP26 581 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 CTSHP09668 335 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 MGAT3Q09327 533 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 ME3Q16798 604 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 FAM160B1Q5W0V3 765 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 PPP2R2DQ66LE6 453 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 POTEBQ6S5H4 581 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 SLC17A8Q8NDX2 589 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 MAFAQ8NHW3 353 aaPredicted RBP33.32■■■□□ 2.92
RAB40C-211ENST00000568586 MBOAT7Q96N66 472 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 TRPC6Q9Y210 931 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 PTPRSQ13332 1948 aa33.32■■■□□ 2.92
RAB40C-211ENST00000568586 MSH4O15457 936 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 CA3P07451 260 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 NEK4P51957 841 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 Q4G0T1 1027 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 MOXD1Q6UVY6 613 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 RSPH3Q86UC2 560 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 ATP8B4Q8TF62 1192 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 SEPT8Q92599 483 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 GTF3C6Q969F1 213 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 RIT2Q99578 217 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 PRDM12Q9H4Q4 367 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 PCDHA2Q9Y5H9 948 aa33.31■■■□□ 2.92
RAB40C-211ENST00000568586 MAFBQ9Y5Q3 323 aaPredicted RBP33.31■■■□□ 2.92
RAB40C-211ENST00000568586 HBP1O60381 514 aa33.3■■■□□ 2.92
RAB40C-211ENST00000568586 GJB5O95377 273 aa33.3■■■□□ 2.92
RAB40C-211ENST00000568586 SLC5A5Q92911 643 aa33.3■■■□□ 2.92
RAB40C-211ENST00000568586 ZNF302Q9NR11 478 aa33.3■■■□□ 2.92
RAB40C-211ENST00000568586 PCDHA10Q9Y5I2 948 aa33.3■■■□□ 2.92
RAB40C-211ENST00000568586 BACH1O14867 736 aa33.29■■■□□ 2.92
RAB40C-211ENST00000568586 ATP4AP20648 1035 aa33.29■■■□□ 2.92
RAB40C-211ENST00000568586 IGBP1P78318 339 aa33.29■■■□□ 2.92
RAB40C-211ENST00000568586 SWSAP1Q6NVH7 229 aa33.29■■■□□ 2.92
RAB40C-211ENST00000568586 DNAJB3Q8WWF6 145 aa33.29■■■□□ 2.92
RAB40C-211ENST00000568586 APBB2Q92870 758 aa33.29■■■□□ 2.92
RAB40C-211ENST00000568586 UIMC1Q96RL1 719 aa33.29■■■□□ 2.92
RAB40C-211ENST00000568586 KCNJ14Q9UNX9 436 aa33.29■■■□□ 2.92
RAB40C-211ENST00000568586 LARGE1O95461 756 aa33.28■■■□□ 2.92
RAB40C-211ENST00000568586 FDPSP14324 419 aaKnown RBP33.28■■■□□ 2.92
RAB40C-211ENST00000568586 XBP1P17861 261 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms