RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TPM2P07951 284 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 ATXN8OSP0DMR3 200 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 HOXA7P31268 230 aaPredicted RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 ADKP55263 362 aaKnown RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 RINT1Q6NUQ1 792 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 FASTKD5Q7L8L6 764 aaKnown RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 NIPA1Q7RTP0 329 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 APTXQ7Z2E3 356 aaKnown RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 SFR1Q86XK3 245 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 GUF1Q8N442 669 aaKnown RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 MB21D1Q8N884 522 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 CHST13Q8NET6 341 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 TSG101Q99816 390 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 THAP9Q9H5L6 903 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 MRPL44Q9H9J2 332 aaKnown RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 RBBP6Q7Z6E9 1792 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 FAM13AO94988 1023 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 P4HBP07237 508 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 OSBPP22059 807 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 CENPPQ6IPU0 288 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 PPFIBP1Q86W92 1011 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 IRF2BP1Q8IU81 584 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 MYCT1Q8N699 235 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 SMCR8Q8TEV9 937 aaPredicted RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 CNOT6LQ96LI5 555 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 BCAS3Q9H6U6 928 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 LIMA1Q9UHB6 759 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 KIAA1217Q5T5P2 1943 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 POTEB2H3BUK9 544 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 GCNT3O95395 438 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 CYP2C8P10632 490 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 EEF1GP26641 437 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 EHHADHQ08426 723 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 SNAPC2Q13487 334 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 GNPTABQ3T906 1256 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 UTP14CQ5TAP6 766 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 SEPT14Q6ZU15 432 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 EEPD1Q7L9B9 569 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 FAM114A1Q8IWE2 563 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 PCMTD1Q96MG8 357 aaPredicted RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 TUBGCP2Q9BSJ2 902 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 MOV10L1Q9BXT6 1211 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 ZSWIM4Q9H7M6 989 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 TXNRD2Q9NNW7 524 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 TRMT1Q9NXH9 659 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 FBXO40Q9UH90 709 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 KCNH4Q9UQ05 1017 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 FRMPD4Q14CM0 1322 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 TMEM150BA6NC51 233 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 WDR64B1ANS9 1081 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 B4DLN1 442 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 PRPF6O94906 941 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 GJA5P36382 358 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 QARSP47897 775 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 CASP5P51878 434 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 CCZ1BP86790 482 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 CCZ1P86791 482 aaPredicted RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 FSTL1Q12841 308 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 STXBP2Q15833 593 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 Q3C1V9 767 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 RIOX2Q8IUF8 465 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 NOC3LQ8WTT2 800 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 NOC4LQ9BVI4 516 aaKnown RBP7.83□□□□□ -1.16
SMG1-215ENST00000568239 R3HDMLQ9H3Y0 253 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 COL4A3BPQ9Y5P4 624 aa7.83□□□□□ -1.16
SMG1-215ENST00000568239 KIF20AO95235 890 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 CELF2O95319 508 aaKnown RBP7.82□□□□□ -1.16
SMG1-215ENST00000568239 CCNE2O96020 404 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 PGK2P07205 417 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 TPM1P09493 284 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 MYBP10242 640 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 KRT76Q01546 638 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 LRRC63Q05C16 580 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 RBL2Q08999 1139 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 LDLRAD1Q5T700 205 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 CEP135Q66GS9 1140 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 XRRA1Q6P2D8 792 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 B3GNT9Q6UX72 402 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 SCFD1Q8WVM8 642 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 GPRASP2Q96D09 838 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 PFASO15067 1338 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 LRRC10BA6NIK2 292 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 USO1O60763 962 aaKnown RBP7.82□□□□□ -1.16
SMG1-215ENST00000568239 RGS20O76081 388 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 ECM2O94769 699 aaPredicted RBP7.82□□□□□ -1.16
SMG1-215ENST00000568239 FGFR1OPO95684 399 aaKnown RBP7.82□□□□□ -1.16
SMG1-215ENST00000568239 CASP14P31944 242 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 YWHABP31946 246 aaKnown RBP7.82□□□□□ -1.16
SMG1-215ENST00000568239 CCDC40Q4G0X9 1142 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 COBLL1Q53SF7 1204 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 PADI6Q6TGC4 694 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 C1orf186Q6ZWK4 172 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 NEK9Q8TD19 979 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 C16orf45Q96MC5 204 aaPredicted RBP7.82□□□□□ -1.16
SMG1-215ENST00000568239 INPP4AQ96PE3 977 aaPredicted RBP7.82□□□□□ -1.16
SMG1-215ENST00000568239 PARVGQ9HBI0 331 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 GBA2Q9HCG7 927 aaPredicted RBP7.82□□□□□ -1.16
SMG1-215ENST00000568239 RBPJLQ9UBG7 517 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 PCDHA2Q9Y5H9 948 aa7.82□□□□□ -1.16
SMG1-215ENST00000568239 DOCK5Q9H7D0 1870 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms