RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 GABBR1Q9UBS5 961 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 CEP131Q9UPN4 1083 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 MAFBQ9Y5Q3 323 aaPredicted RBP20.25■□□□□ 0.83
COMMD4-222ENST00000568034 H3BRB1 525 aa20.24■□□□□ 0.83
COMMD4-222ENST00000568034 ZNF862O60290 1169 aa20.24■□□□□ 0.83
COMMD4-222ENST00000568034 STAT5BP51692 787 aa20.24■□□□□ 0.83
COMMD4-222ENST00000568034 ATL3Q6DD88 541 aa20.24■□□□□ 0.83
COMMD4-222ENST00000568034 SMARCAD1Q9H4L7 1026 aa20.24■□□□□ 0.83
COMMD4-222ENST00000568034 TUT1Q9H6E5 874 aaKnown RBP20.24■□□□□ 0.83
COMMD4-222ENST00000568034 ZNF302Q9NR11 478 aa20.24■□□□□ 0.83
COMMD4-222ENST00000568034 WRAP73Q9P2S5 460 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-222ENST00000568034 FBXO2Q9UK22 296 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-222ENST00000568034 SAMM50Q9Y512 469 aa20.24■□□□□ 0.83
COMMD4-222ENST00000568034 ALPK3Q96L96 1907 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 A0A0U1RQG5 324 aaPredicted RBP20.23■□□□□ 0.83
COMMD4-222ENST00000568034 BACH1O14867 736 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 YEATS4O95619 227 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 MARK3P27448 753 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 MARCKSP29966 332 aaPredicted RBP20.23■□□□□ 0.83
COMMD4-222ENST00000568034 CDK7P50613 346 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 ITGA7Q13683 1181 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 KIAA0753Q2KHM9 967 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 NBPF20Q3BBV1 942 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 SLC39A5Q6ZMH5 540 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 DTHD1Q6ZMT9 781 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 GLG1Q92896 1179 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 EIF2AK1Q9BQI3 630 aaKnown RBP20.23■□□□□ 0.83
COMMD4-222ENST00000568034 KATNAL1Q9BW62 490 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 RNPEPQ9H4A4 650 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 AZI2Q9H6S1 392 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 ERAP1Q9NZ08 941 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 RGL1Q9NZL6 768 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 CHMP5Q9NZZ3 219 aa20.23■□□□□ 0.83
COMMD4-222ENST00000568034 ZNF215Q9UL58 517 aaPredicted RBP20.23■□□□□ 0.83
COMMD4-222ENST00000568034 VWA3AA6NCI4 1184 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 PP2D1A8MPX8 630 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 STBD1O95210 358 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 ATN1P54259 1190 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-222ENST00000568034 HIC1Q14526 733 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 PDIA5Q14554 519 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 PLCB4Q15147 1175 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 LRRC26Q2I0M4 334 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 TMEM266Q2M3C6 531 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 C1orf53Q5VUE5 145 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 FAM160B1Q5W0V3 765 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 PDXDC2PQ6P474 469 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 BANK1Q8NDB2 785 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 DYDC2Q96IM9 177 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 HSD17B14Q9BPX1 270 aa20.22■□□□□ 0.83
COMMD4-222ENST00000568034 MYH9P35579 1960 aaKnown RBP20.21■□□□□ 0.83
COMMD4-222ENST00000568034 ARVCFO00192 962 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 SPATA31C1P0DKV0 1188 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 HOXC8P31273 242 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 SLC26A2P50443 739 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 STK38Q15208 465 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 NFRKBQ6P4R8 1299 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 SESTD1Q86VW0 696 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 LXNQ9BS40 222 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 MMTAG2Q9BU76 263 aaKnown RBP20.21■□□□□ 0.83
COMMD4-222ENST00000568034 ATP6V1DQ9Y5K8 247 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 SRPRBQ9Y5M8 271 aaKnown RBP20.21■□□□□ 0.83
COMMD4-222ENST00000568034 TCHHQ07283 1943 aa20.21■□□□□ 0.83
COMMD4-222ENST00000568034 SPTLC2O15270 562 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 PPP6R2O75170 966 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 MED24O75448 989 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 SLITRK3O94933 977 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 P4HBP07237 508 aaKnown RBP20.2■□□□□ 0.82
COMMD4-222ENST00000568034 SMIM10L2AP0DMW4 78 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 SMIM10L2BP0DMW5 78 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 QARSP47897 775 aaKnown RBP20.2■□□□□ 0.82
COMMD4-222ENST00000568034 RGS19P49795 217 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 PSMC5P62195 406 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 PRKCEQ02156 737 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 CYP4A11Q02928 519 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 CTTNQ14247 550 aaKnown RBP20.2■□□□□ 0.82
COMMD4-222ENST00000568034 NEK9Q8TD19 979 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 ATP8B4Q8TF62 1192 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 ATP6V0A1Q93050 837 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 VTI1AQ96AJ9 217 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 HDAC6Q9UBN7 1215 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 LRWD1Q9UFC0 647 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 RCOR1Q9UKL0 485 aa20.2■□□□□ 0.82
COMMD4-222ENST00000568034 CDC25AP30304 524 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 CHMP4BP1P59074 171 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 KRT85P78386 507 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 ECM1Q16610 540 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 TRIM60Q495X7 471 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 CATSPER3Q86XQ3 398 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 FAM126BQ8IXS8 530 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 CLIC6Q96NY7 704 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 CTAGE1Q96RT6 745 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 POLR3CQ9BUI4 534 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-222ENST00000568034 CSRNP2Q9H175 543 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 GTF2IRD1Q9UHL9 959 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 CFAP45Q9UL16 551 aa20.19■□□□□ 0.82
COMMD4-222ENST00000568034 POTEB3A0JP26 581 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 ZBTB42B2RXF5 422 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 LYPLA2O95372 231 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 OATP04181 439 aa20.18■□□□□ 0.82
COMMD4-222ENST00000568034 RPA1P27694 616 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms