RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 GLG1Q92896 1179 aa28.61■■■□□ 2.17
FANCA-228ENST00000567943 LENG9Q96B70 501 aa28.61■■■□□ 2.17
FANCA-228ENST00000567943 KIF2CQ99661 725 aa28.61■■■□□ 2.17
FANCA-228ENST00000567943 NKX2-4Q9H2Z4 354 aa28.61■■■□□ 2.17
FANCA-228ENST00000567943 PCDHA4Q9UN74 947 aa28.61■■■□□ 2.17
FANCA-228ENST00000567943 REV3LO60673 3130 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 RSPH10B2B2RC85 870 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 BAIAP3O94812 1187 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 RSPH10BP0C881 870 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 GNAT1P11488 350 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 CIITAP33076 1130 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 MARCH8Q5T0T0 291 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 CNKSR3Q6P9H4 555 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 MSRAQ9UJ68 235 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 WDR81Q562E7 1941 aa28.6■■■□□ 2.17
FANCA-228ENST00000567943 MICAL3Q7RTP6 2002 aa28.59■■■□□ 2.17
FANCA-228ENST00000567943 M0R2N6 131 aa28.59■■■□□ 2.17
FANCA-228ENST00000567943 WDR5P61964 334 aaKnown RBP28.59■■■□□ 2.17
FANCA-228ENST00000567943 PPFIA1Q13136 1202 aa28.59■■■□□ 2.17
FANCA-228ENST00000567943 RUFY4Q6ZNE9 571 aa28.59■■■□□ 2.17
FANCA-228ENST00000567943 ORC3Q9UBD5 711 aaPredicted RBP28.59■■■□□ 2.17
FANCA-228ENST00000567943 PCDHA11Q9Y5I1 949 aa28.59■■■□□ 2.17
FANCA-228ENST00000567943 IGKV6D-21A0A0A0MT36 114 aa28.58■■■□□ 2.17
FANCA-228ENST00000567943 DDX39AO00148 427 aaKnown RBP28.58■■■□□ 2.17
FANCA-228ENST00000567943 IPO5O00410 1097 aaKnown RBP28.58■■■□□ 2.17
FANCA-228ENST00000567943 RBM25P49756 843 aaKnown RBP28.58■■■□□ 2.17
FANCA-228ENST00000567943 GRIK4Q16099 956 aa28.58■■■□□ 2.17
FANCA-228ENST00000567943 BLIDQ8IZY5 108 aa28.58■■■□□ 2.17
FANCA-228ENST00000567943 FAM177A1Q8N128 213 aaPredicted RBP28.58■■■□□ 2.17
FANCA-228ENST00000567943 PHOSPHO2Q8TCD6 241 aa28.58■■■□□ 2.17
FANCA-228ENST00000567943 SLC9A7Q96T83 725 aa28.58■■■□□ 2.17
FANCA-228ENST00000567943 KCNJ14Q9UNX9 436 aa28.58■■■□□ 2.17
FANCA-228ENST00000567943 MBLAC1A4D2B0 266 aaPredicted RBP28.57■■■□□ 2.16
FANCA-228ENST00000567943 CTSHP09668 335 aa28.57■■■□□ 2.16
FANCA-228ENST00000567943 DEFB103AP81534 67 aa28.57■■■□□ 2.16
FANCA-228ENST00000567943 MKRN4PQ13434 485 aaPredicted RBP28.57■■■□□ 2.16
FANCA-228ENST00000567943 GALNT17Q6IS24 598 aa28.57■■■□□ 2.16
FANCA-228ENST00000567943 ABHD15Q6UXT9 468 aa28.57■■■□□ 2.16
FANCA-228ENST00000567943 TMCO2Q7Z6W1 182 aaPredicted RBP28.57■■■□□ 2.16
FANCA-228ENST00000567943 HERC6Q8IVU3 1022 aa28.57■■■□□ 2.16
FANCA-228ENST00000567943 DAGLBQ8NCG7 672 aa28.57■■■□□ 2.16
FANCA-228ENST00000567943 ZBTB10Q96DT7 871 aa28.57■■■□□ 2.16
FANCA-228ENST00000567943 CAND2O75155 1236 aa28.56■■■□□ 2.16
FANCA-228ENST00000567943 INSRRP14616 1297 aa28.56■■■□□ 2.16
FANCA-228ENST00000567943 PLCB4Q15147 1175 aa28.56■■■□□ 2.16
FANCA-228ENST00000567943 PRR16Q569H4 304 aa28.56■■■□□ 2.16
FANCA-228ENST00000567943 PLPPR4Q7Z2D5 763 aa28.56■■■□□ 2.16
FANCA-228ENST00000567943 GJB4Q9NTQ9 266 aa28.56■■■□□ 2.16
FANCA-228ENST00000567943 LIMCH1Q9UPQ0 1083 aa28.56■■■□□ 2.16
FANCA-228ENST00000567943 MYH9P35579 1960 aaKnown RBP28.55■■■□□ 2.16
FANCA-228ENST00000567943 ARHGEF15O94989 841 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 XBP1P17861 261 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 STAT5BP51692 787 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 SETQ01105 290 aaPredicted RBP28.55■■■□□ 2.16
FANCA-228ENST00000567943 PLEKHG4Q58EX7 1191 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 FAM26DQ5JW98 314 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 RPAINQ86UA6 219 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 NSUN7Q8NE18 718 aaKnown RBP28.55■■■□□ 2.16
FANCA-228ENST00000567943 DBF4BQ8NFT6 615 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 WASF1Q92558 559 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 ZNF577Q9BSK1 485 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 PHF20Q9BVI0 1012 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 AZI2Q9H6S1 392 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 UPF2Q9HAU5 1272 aaKnown RBP28.55■■■□□ 2.16
FANCA-228ENST00000567943 TUBE1Q9UJT0 475 aa28.55■■■□□ 2.16
FANCA-228ENST00000567943 ABHD14A-ACY1A0A1B0GW23 586 aa28.54■■■□□ 2.16
FANCA-228ENST00000567943 CHRNA1P02708 482 aa28.54■■■□□ 2.16
FANCA-228ENST00000567943 FDPSP14324 419 aaKnown RBP28.54■■■□□ 2.16
FANCA-228ENST00000567943 CCDC60Q8IWA6 550 aaPredicted RBP28.54■■■□□ 2.16
FANCA-228ENST00000567943 TBCKQ8TEA7 893 aa28.54■■■□□ 2.16
FANCA-228ENST00000567943 PRDM12Q9H4Q4 367 aa28.54■■■□□ 2.16
FANCA-228ENST00000567943 SLC28A3Q9HAS3 691 aa28.54■■■□□ 2.16
FANCA-228ENST00000567943 JAK2O60674 1132 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 CA3P07451 260 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 FOSL2P15408 326 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 USP11P51784 963 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 IGBP1P78318 339 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 ST3GAL1Q11201 340 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 TRAPPC12Q8WVT3 735 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 LOXHD1Q8IVV2 1947 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 VCANP13611 3396 aa28.53■■■□□ 2.16
FANCA-228ENST00000567943 KCNJ6P48051 423 aa28.52■■■□□ 2.16
FANCA-228ENST00000567943 IKBKEQ14164 716 aa28.52■■■□□ 2.16
FANCA-228ENST00000567943 TAF2Q6P1X5 1199 aa28.52■■■□□ 2.16
FANCA-228ENST00000567943 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.52■■■□□ 2.16
FANCA-228ENST00000567943 TBC1D22BQ9NU19 505 aa28.52■■■□□ 2.16
FANCA-228ENST00000567943 MSH4O15457 936 aa28.51■■■□□ 2.15
FANCA-228ENST00000567943 ATP4AP20648 1035 aa28.51■■■□□ 2.15
FANCA-228ENST00000567943 MGAT3Q09327 533 aa28.51■■■□□ 2.15
FANCA-228ENST00000567943 ADGRE1Q14246 886 aa28.51■■■□□ 2.15
FANCA-228ENST00000567943 PPP2R2DQ66LE6 453 aa28.51■■■□□ 2.15
FANCA-228ENST00000567943 SLC17A8Q8NDX2 589 aa28.51■■■□□ 2.15
FANCA-228ENST00000567943 MAFAQ8NHW3 353 aaPredicted RBP28.51■■■□□ 2.15
FANCA-228ENST00000567943 DNAJB3Q8WWF6 145 aa28.51■■■□□ 2.15
FANCA-228ENST00000567943 TRPC6Q9Y210 931 aa28.51■■■□□ 2.15
FANCA-228ENST00000567943 SPTBN5Q9NRC6 3674 aaKnown RBP28.51■■■□□ 2.15
FANCA-228ENST00000567943 POTEB3A0JP26 581 aa28.5■■■□□ 2.15
FANCA-228ENST00000567943 RRN3P2A6NIE6 340 aa28.5■■■□□ 2.15
FANCA-228ENST00000567943 NONOQ15233 471 aaKnown RBP eCLIP28.5■■■□□ 2.158e-11■■□□□ 11.4
FANCA-228ENST00000567943 ZNF746Q6NUN9 644 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms