RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 TUBE1Q9UJT0 475 aa17.48■□□□□ 0.39
CDR2-206ENST00000567406 CDY2AQ9Y6F7 541 aa17.48■□□□□ 0.39
CDR2-206ENST00000567406 SMCO2A6NFE2 343 aa17.47■□□□□ 0.39
CDR2-206ENST00000567406 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
CDR2-206ENST00000567406 GOLGA8BA8MQT2 603 aa17.47■□□□□ 0.39
CDR2-206ENST00000567406 INSRRP14616 1297 aa17.47■□□□□ 0.39
CDR2-206ENST00000567406 ADCY7P51828 1080 aa17.47■□□□□ 0.39
CDR2-206ENST00000567406 TMEM62Q0P6H9 643 aa17.47■□□□□ 0.39
CDR2-206ENST00000567406 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
CDR2-206ENST00000567406 CENPQQ7L2Z9 268 aaPredicted RBP17.47■□□□□ 0.39
CDR2-206ENST00000567406 EHMT1Q9H9B1 1298 aa17.47■□□□□ 0.39
CDR2-206ENST00000567406 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
CDR2-206ENST00000567406 MBLAC1A4D2B0 266 aaPredicted RBP17.46■□□□□ 0.39
CDR2-206ENST00000567406 DDX39AO00148 427 aaKnown RBP17.46■□□□□ 0.39
CDR2-206ENST00000567406 ENPP3O14638 875 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 CSPG5O95196 566 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
CDR2-206ENST00000567406 ACTR2P61160 394 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 GPM6BQ13491 265 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 TAF2Q6P1X5 1199 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 TMEM192Q8IY95 271 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 APBB2Q92870 758 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 KHSRPQ92945 711 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDR2-206ENST00000567406 ANO3Q9BYT9 981 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 UBE2ZQ9H832 354 aaPredicted RBP17.46■□□□□ 0.39
CDR2-206ENST00000567406 AGO3Q9H9G7 860 aaKnown RBP17.46■□□□□ 0.39
CDR2-206ENST00000567406 TRPC6Q9Y210 931 aa17.46■□□□□ 0.39
CDR2-206ENST00000567406 MAFGO15525 162 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 KCNA5P22460 613 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 CD52P31358 61 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 APOBRQ0VD83 1088 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 PLCB4Q15147 1175 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 FBXO47Q5MNV8 452 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 JAKMIP3Q5VZ66 844 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 RPAINQ86UA6 219 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 SDF4Q9BRK5 362 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 EPHX3Q9H6B9 360 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 AZI2Q9H6S1 392 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 AGO4Q9HCK5 861 aaKnown RBP17.45■□□□□ 0.38
CDR2-206ENST00000567406 CD320Q9NPF0 282 aa17.45■□□□□ 0.38
CDR2-206ENST00000567406 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.44■□□□□ 0.38
CDR2-206ENST00000567406 H3BNC9 293 aa17.44■□□□□ 0.38
CDR2-206ENST00000567406 CDC45O75419 566 aa17.44■□□□□ 0.38
CDR2-206ENST00000567406 MRPS6P82932 125 aaKnown RBP17.44■□□□□ 0.38
CDR2-206ENST00000567406 TSGA10IPQ3SY00 556 aa17.44■□□□□ 0.38
CDR2-206ENST00000567406 CEP55Q53EZ4 464 aa17.44■□□□□ 0.38
CDR2-206ENST00000567406 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
CDR2-206ENST00000567406 LINC01599Q8WXQ3 324 aa17.44■□□□□ 0.38
CDR2-206ENST00000567406 MRPL38Q96DV4 380 aaKnown RBP17.44■□□□□ 0.38
CDR2-206ENST00000567406 BARHL2Q9NY43 387 aa17.44■□□□□ 0.38
CDR2-206ENST00000567406 NLRC5Q86WI3 1866 aa17.44■□□□□ 0.38
CDR2-206ENST00000567406 CCNE2O96020 404 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 IBSPP21815 317 aaPredicted RBP17.43■□□□□ 0.38
CDR2-206ENST00000567406 CTNNB1P35222 781 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 ZNF76P36508 570 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 CLK2P49760 499 aaKnown RBP17.43■□□□□ 0.38
CDR2-206ENST00000567406 STAT5BP51692 787 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 FGD1P98174 961 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 TCEAL5Q5H9L2 206 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 PPP1R18Q6NYC8 613 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 EP400NLQ6ZTU2 488 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 Q6ZUG5 572 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 RTN4RL1Q86UN2 441 aaPredicted RBP17.43■□□□□ 0.38
CDR2-206ENST00000567406 FIBCD1Q8N539 461 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.43■□□□□ 0.38
CDR2-206ENST00000567406 NFASCO94856 1347 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 LOXHD1Q8IVV2 1947 aa17.43■□□□□ 0.38
CDR2-206ENST00000567406 RRN3P2A6NIE6 340 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 FAM86B1E9PN63 330 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 H3BQ06 376 aaPredicted RBP17.42■□□□□ 0.38
CDR2-206ENST00000567406 MEIS1O00470 390 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 FOSP01100 380 aaPredicted RBP17.42■□□□□ 0.38
CDR2-206ENST00000567406 FAM86B2P0C5J1 330 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 LINC00271P0C7V0 271 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 SREBF1P36956 1147 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 PTPROQ16827 1216 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 TSHZ1Q6ZSZ6 1077 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 TRMT1LQ7Z2T5 733 aaKnown RBP17.42■□□□□ 0.38
CDR2-206ENST00000567406 BANK1Q8NDB2 785 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 JAKMIP1Q96N16 626 aaKnown RBP17.42■□□□□ 0.38
CDR2-206ENST00000567406 SAMD11Q96NU1 681 aa17.42■□□□□ 0.38
CDR2-206ENST00000567406 POTEB3A0JP26 581 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 GRM6O15303 877 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 IL9P15248 144 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 METAP2P50579 478 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDR2-206ENST00000567406 KRT32Q14532 448 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 TMEM266Q2M3C6 531 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 POTEBQ6S5H4 581 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 PLPPR4Q7Z2D5 763 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 PLA2G4DQ86XP0 818 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 BRF1Q92994 677 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 PCDHA2Q9Y5H9 948 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 TRPV2Q9Y5S1 764 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 SNX14Q9Y5W7 946 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 TTC3P53804 2025 aa17.41■□□□□ 0.38
CDR2-206ENST00000567406 BACH1O14867 736 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 ATG7O95352 703 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 KLRC1P26715 233 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms