RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 CTSHP09668 335 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 ARP10275 920 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 SCG2P13521 617 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 MARK3P27448 753 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 PSMA5P28066 241 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 ERVK-21P61565 698 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 GRB10Q13322 594 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 GRIK4Q16099 956 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 PLPPR4Q7Z2D5 763 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 SPRED2Q7Z698 418 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
COMMD4-216ENST00000567023 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 SDF4Q9BRK5 362 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 PKD2L1Q9P0L9 805 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 TUBE1Q9UJT0 475 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 LINC01553A4QN01 128 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 RRN3P2A6NIE6 340 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 PRPF3O43395 683 aaKnown RBP16.25■□□□□ 0.19
COMMD4-216ENST00000567023 CYP3A4P08684 503 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 ACTR2P61160 394 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 MGAT3Q09327 533 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 ITGB3BPQ13352 177 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-216ENST00000567023 NTRK3Q16288 839 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 PKN1Q16512 942 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 RUFY4Q6ZNE9 571 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 MYOCDQ8IZQ8 938 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 SP7Q8TDD2 431 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-216ENST00000567023 TGS1Q96RS0 853 aaKnown RBP16.25■□□□□ 0.19
COMMD4-216ENST00000567023 IFIH1Q9BYX4 1025 aaKnown RBP16.25■□□□□ 0.19
COMMD4-216ENST00000567023 SUGCTQ9HAC7 445 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 TMEM260Q9NX78 707 aa16.25■□□□□ 0.19
COMMD4-216ENST00000567023 NAP1L2Q9ULW6 460 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-216ENST00000567023 IGKV6D-21A0A0A0MT36 114 aa16.24■□□□□ 0.19
COMMD4-216ENST00000567023 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-216ENST00000567023 RBAK-RBAKDNI3L0D1 243 aa16.24■□□□□ 0.19
COMMD4-216ENST00000567023 INSRRP14616 1297 aa16.24■□□□□ 0.19
COMMD4-216ENST00000567023 SLC26A2P50443 739 aa16.24■□□□□ 0.19
COMMD4-216ENST00000567023 RSPH3Q86UC2 560 aa16.24■□□□□ 0.19
COMMD4-216ENST00000567023 CCDC12Q8WUD4 166 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-216ENST00000567023 AZI2Q9H6S1 392 aa16.24■□□□□ 0.19
COMMD4-216ENST00000567023 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
COMMD4-216ENST00000567023 IGLV3-22A0A075B6J6 115 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 FAM86B1E9PN63 330 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 FAM86B2P0C5J1 330 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 GNA11P29992 359 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 STAT5BP51692 787 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 JAKMIP3Q5VZ66 844 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 KRT40Q6A162 431 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 FAM117BQ6P1L5 589 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 MICALL1Q8N3F8 863 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 DNAJB3Q8WWF6 145 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 RNF26Q9BY78 433 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-216ENST00000567023 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
COMMD4-216ENST00000567023 COL4A6Q14031 1691 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 DHX15O43143 795 aaKnown RBP16.22■□□□□ 0.19
COMMD4-216ENST00000567023 IFNAR1P17181 557 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 PDIA3P30101 505 aaKnown RBP16.22■□□□□ 0.19
COMMD4-216ENST00000567023 ZNF76P36508 570 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 LPIN1Q14693 890 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 PLCB4Q15147 1175 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 AAK1Q2M2I8 961 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 ABHD15Q6UXT9 468 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 RUFY3Q7L099 469 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 COG5Q9UP83 839 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 PCDHA2Q9Y5H9 948 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 SQORQ9Y6N5 450 aa16.22■□□□□ 0.19
COMMD4-216ENST00000567023 IPO5O00410 1097 aaKnown RBP16.21■□□□□ 0.19
COMMD4-216ENST00000567023 ADAMTS3O15072 1205 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 CCNE2O96020 404 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 GHRP10912 638 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 BMP1P13497 986 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 AKAP17AQ02040 695 aaKnown RBP16.21■□□□□ 0.19
COMMD4-216ENST00000567023 FBXO47Q5MNV8 452 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 IER5Q5VY09 327 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 PLA2G4DQ86XP0 818 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 REXO1Q8N1G1 1221 aaKnown RBP16.21■□□□□ 0.19
COMMD4-216ENST00000567023 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 GDPD5Q8WTR4 605 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 PHKBQ93100 1093 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 SAMD11Q96NU1 681 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 SIP14410 1827 aa16.21■□□□□ 0.19
COMMD4-216ENST00000567023 POTEB3A0JP26 581 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 CIITAP33076 1130 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 IGBP1P78318 339 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 MRPS6P82932 125 aaKnown RBP16.2■□□□□ 0.18
COMMD4-216ENST00000567023 SETQ01105 290 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-216ENST00000567023 TFF2Q03403 129 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 TOB2Q14106 344 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-216ENST00000567023 SKIV2LQ15477 1246 aaKnown RBP16.2■□□□□ 0.18
COMMD4-216ENST00000567023 POTEBQ6S5H4 581 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 TSHZ1Q6ZSZ6 1077 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 NME8Q8N427 588 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 YME1L1Q96TA2 773 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 C17orf80Q9BSJ5 609 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 TM6SF1Q9BZW5 370 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 TBC1D22BQ9NU19 505 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms