RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 MARCH8Q5T0T0 291 aa17.83■□□□□ 0.44
PALB2-205ENST00000567003 RALYLQ86SE5 291 aaKnown RBP17.83■□□□□ 0.44
PALB2-205ENST00000567003 ZNF689Q96CS4 500 aaPredicted RBP17.83■□□□□ 0.44
PALB2-205ENST00000567003 SENP7Q9BQF6 1050 aa17.83■□□□□ 0.44
PALB2-205ENST00000567003 FAM49AQ9H0Q0 323 aaPredicted RBP17.83■□□□□ 0.44
PALB2-205ENST00000567003 LMAN2LQ9H0V9 348 aa17.83■□□□□ 0.44
PALB2-205ENST00000567003 AGO3Q9H9G7 860 aaKnown RBP17.83■□□□□ 0.44
PALB2-205ENST00000567003 MRPL42Q9Y6G3 142 aaKnown RBP17.83■□□□□ 0.44
PALB2-205ENST00000567003 PLEKHA8P1O95397 391 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 MMP1P03956 469 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 IBSPP21815 317 aaPredicted RBP17.82■□□□□ 0.44
PALB2-205ENST00000567003 CD52P31358 61 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 TMEM62Q0P6H9 643 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 SMAD4Q13485 552 aaKnown RBP17.82■□□□□ 0.44
PALB2-205ENST00000567003 UBE2SQ16763 222 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 PAN2Q504Q3 1202 aaKnown RBP17.82■□□□□ 0.44
PALB2-205ENST00000567003 TAF2Q6P1X5 1199 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 ADGRD2Q7Z7M1 963 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 NLRX1Q86UT6 975 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 RNF135Q8IUD6 432 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 CMTR1Q8N1G2 835 aaKnown RBP17.82■□□□□ 0.44
PALB2-205ENST00000567003 CUL5Q93034 780 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 PCDHGC5Q9Y5F6 944 aa17.82■□□□□ 0.44
PALB2-205ENST00000567003 hCG_1642624A0A1W2PR95 340 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 NCK2O43639 380 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 DGKIO75912 1065 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 ITGB5P18084 799 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 GATMP50440 423 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 MRPS6P82932 125 aaKnown RBP17.81■□□□□ 0.44
PALB2-205ENST00000567003 TSHZ1Q6ZSZ6 1077 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 RSPH3Q86UC2 560 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 RTN4RL1Q86UN2 441 aaPredicted RBP17.81■□□□□ 0.44
PALB2-205ENST00000567003 ZNF654Q8IZM8 581 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 NCOA7Q8NI08 942 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 GLG1Q92896 1179 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 RRP36Q96EU6 259 aaKnown RBP17.81■□□□□ 0.44
PALB2-205ENST00000567003 CD207Q9UJ71 328 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 PLAGL2Q9UPG8 496 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 RWDD3Q9Y3V2 267 aa17.81■□□□□ 0.44
PALB2-205ENST00000567003 MBLAC1A4D2B0 266 aaPredicted RBP17.8■□□□□ 0.44
PALB2-205ENST00000567003 STXBP3O00186 592 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 PIK3CDO00329 1044 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 ITGB1P05556 798 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 RXRAP19793 462 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 NDUFV1P49821 464 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
PALB2-205ENST00000567003 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
PALB2-205ENST00000567003 TTC22Q5TAA0 569 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 XRRA1Q6P2D8 792 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 RAB11FIP4Q86YS3 637 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 MB21D2Q8IYB1 491 aaPredicted RBP17.8■□□□□ 0.44
PALB2-205ENST00000567003 TRAPPC12Q8WVT3 735 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 SEPT1Q8WYJ6 367 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 GPRASP2Q96D09 838 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 PCYT2Q99447 389 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 SPZ1Q9BXG8 430 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 UPF3BQ9BZI7 483 aaKnown RBP17.8■□□□□ 0.44
PALB2-205ENST00000567003 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 ERAP1Q9NZ08 941 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 PLXNA4Q9HCM2 1894 aa17.8■□□□□ 0.44
PALB2-205ENST00000567003 ADAM15Q13444 863 aa17.79■□□□□ 0.44
PALB2-205ENST00000567003 AAMPQ13685 434 aa17.79■□□□□ 0.44
PALB2-205ENST00000567003 HERC4Q5GLZ8 1057 aaPredicted RBP17.79■□□□□ 0.44
PALB2-205ENST00000567003 SRBD1Q8N5C6 995 aaKnown RBP17.79■□□□□ 0.44
PALB2-205ENST00000567003 GIMAP8Q8ND71 665 aaPredicted RBP17.79■□□□□ 0.44
PALB2-205ENST00000567003 CTCFLQ8NI51 663 aaPredicted RBP17.79■□□□□ 0.44
PALB2-205ENST00000567003 MSLNLQ96KJ4 702 aa17.79■□□□□ 0.44
PALB2-205ENST00000567003 PHOX2BQ99453 314 aa17.79■□□□□ 0.44
PALB2-205ENST00000567003 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
PALB2-205ENST00000567003 USP34Q70CQ2 3546 aa17.78■□□□□ 0.44
PALB2-205ENST00000567003 INSRRP14616 1297 aa17.78■□□□□ 0.44
PALB2-205ENST00000567003 CHMLP26374 656 aa17.78■□□□□ 0.44
PALB2-205ENST00000567003 KLHL23Q8NBE8 558 aa17.78■□□□□ 0.44
PALB2-205ENST00000567003 SPPL3Q8TCT6 385 aa17.78■□□□□ 0.44
PALB2-205ENST00000567003 POP1Q99575 1024 aaKnown RBP17.78■□□□□ 0.44
PALB2-205ENST00000567003 PLVAPQ9BX97 442 aa17.78■□□□□ 0.44
PALB2-205ENST00000567003 CLEC1BQ9P126 229 aa17.78■□□□□ 0.44
PALB2-205ENST00000567003 UBIAD1Q9Y5Z9 338 aa17.78■□□□□ 0.44
PALB2-205ENST00000567003 ZDBF2Q9HCK1 2354 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 DDAH1O94760 285 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 NRIP1P48552 1158 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 MTMR1Q13613 665 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 RBM23Q86U06 439 aaKnown RBP17.77■□□□□ 0.44
PALB2-205ENST00000567003 CMTR2Q8IYT2 770 aaKnown RBP17.77■□□□□ 0.44
PALB2-205ENST00000567003 CRIPAKQ8N1N5 446 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 SMARCAD1Q9H4L7 1026 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 PSTPIP2Q9H939 334 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 PADI3Q9ULW8 664 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 BARX2Q9UMQ3 279 aaPredicted RBP17.77■□□□□ 0.44
PALB2-205ENST00000567003 TRPC6Q9Y210 931 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 TRPV2Q9Y5S1 764 aa17.77■□□□□ 0.44
PALB2-205ENST00000567003 PPFIA3O75145 1194 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 GLP2RO95838 553 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 KIF5BP33176 963 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 RBM10P98175 930 aaKnown RBP17.76■□□□□ 0.43
PALB2-205ENST00000567003 TMEM266Q2M3C6 531 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 NPAS4Q8IUM7 802 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 PRSS33Q8NF86 280 aa17.76■□□□□ 0.43
PALB2-205ENST00000567003 POF1BQ8WVV4 589 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms