RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.59■■■□□ 2.65
UBFD1-206ENST00000566669 KCNQ1P51787 676 aa31.59■■■□□ 2.65
UBFD1-206ENST00000566669 MRPL38Q96DV4 380 aaKnown RBP31.59■■■□□ 2.65
UBFD1-206ENST00000566669 ANO3Q9BYT9 981 aa31.59■■■□□ 2.65
UBFD1-206ENST00000566669 BRPF3Q9ULD4 1205 aa31.59■■■□□ 2.65
UBFD1-206ENST00000566669 COL4A4P53420 1690 aaPredicted RBP31.59■■■□□ 2.65
UBFD1-206ENST00000566669 DOCK5Q9H7D0 1870 aa31.59■■■□□ 2.65
UBFD1-206ENST00000566669 KLF18A0A0U1RQI7 1052 aa31.58■■■□□ 2.65
UBFD1-206ENST00000566669 SMCO2A6NFE2 343 aa31.58■■■□□ 2.65
UBFD1-206ENST00000566669 MARK3P27448 753 aa31.58■■■□□ 2.65
UBFD1-206ENST00000566669 SREBF1P36956 1147 aa31.58■■■□□ 2.65
UBFD1-206ENST00000566669 EPC2Q52LR7 807 aa31.58■■■□□ 2.65
UBFD1-206ENST00000566669 CCDC12Q8WUD4 166 aaPredicted RBP31.58■■■□□ 2.65
UBFD1-206ENST00000566669 C17orf80Q9BSJ5 609 aa31.58■■■□□ 2.65
UBFD1-206ENST00000566669 PKD2L1Q9P0L9 805 aa31.58■■■□□ 2.65
UBFD1-206ENST00000566669 M0QZ92 97 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 STXBP3O00186 592 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 UPP2O95045 317 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 MGAT3Q09327 533 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 TIGD5Q53EQ6 642 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 RUFY4Q6ZNE9 571 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 TSHZ1Q6ZSZ6 1077 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 RASEFQ8IZ41 740 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 IL17RAQ96F46 866 aa31.57■■■□□ 2.64
UBFD1-206ENST00000566669 H3BNC9 293 aa31.56■■■□□ 2.64
UBFD1-206ENST00000566669 MEIS1O00470 390 aa31.56■■■□□ 2.64
UBFD1-206ENST00000566669 GHRP10912 638 aa31.56■■■□□ 2.64
UBFD1-206ENST00000566669 ACTR2P61160 394 aa31.56■■■□□ 2.64
UBFD1-206ENST00000566669 MARCH8Q5T0T0 291 aa31.56■■■□□ 2.64
UBFD1-206ENST00000566669 C1QTNF1Q9BXJ1 281 aa31.56■■■□□ 2.64
UBFD1-206ENST00000566669 FTHL17Q9BXU8 183 aa31.56■■■□□ 2.64
UBFD1-206ENST00000566669 TRPC6Q9Y210 931 aa31.56■■■□□ 2.64
UBFD1-206ENST00000566669 INSRRP14616 1297 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 ZNF76P36508 570 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 STAT5BP51692 787 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 MRPS6P82932 125 aaKnown RBP31.55■■■□□ 2.64
UBFD1-206ENST00000566669 LPIN1Q14693 890 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 ADCK5Q3MIX3 580 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 TYW1BQ6NUM6 668 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 TMEM192Q8IY95 271 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 NME8Q8N427 588 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 DNAJB3Q8WWF6 145 aa31.55■■■□□ 2.64
UBFD1-206ENST00000566669 AGO4Q9HCK5 861 aaKnown RBP31.55■■■□□ 2.64
UBFD1-206ENST00000566669 ESYT2A0FGR8 921 aa31.54■■■□□ 2.64
UBFD1-206ENST00000566669 RB1P06400 928 aa31.54■■■□□ 2.64
UBFD1-206ENST00000566669 CLK2P49760 499 aaKnown RBP31.54■■■□□ 2.64
UBFD1-206ENST00000566669 METAP2P50579 478 aaKnown RBP eCLIP31.54■■■□□ 2.64
UBFD1-206ENST00000566669 FBXO47Q5MNV8 452 aa31.54■■■□□ 2.64
UBFD1-206ENST00000566669 FBXL16Q8N461 479 aa31.54■■■□□ 2.64
UBFD1-206ENST00000566669 FIBCD1Q8N539 461 aa31.54■■■□□ 2.64
UBFD1-206ENST00000566669 TCEANC2Q96MN5 208 aa31.54■■■□□ 2.64
UBFD1-206ENST00000566669 UBE2ZQ9H832 354 aaPredicted RBP31.54■■■□□ 2.64
UBFD1-206ENST00000566669 PCDHA2Q9Y5H9 948 aa31.54■■■□□ 2.64
UBFD1-206ENST00000566669 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP31.53■■■□□ 2.64
UBFD1-206ENST00000566669 ATG7O95352 703 aa31.53■■■□□ 2.64
UBFD1-206ENST00000566669 PFKFB3Q16875 520 aaPredicted RBP31.53■■■□□ 2.64
UBFD1-206ENST00000566669 KCNB2Q92953 911 aa31.53■■■□□ 2.64
UBFD1-206ENST00000566669 PCYT2Q99447 389 aa31.53■■■□□ 2.64
UBFD1-206ENST00000566669 CDY2AQ9Y6F7 541 aa31.53■■■□□ 2.64
UBFD1-206ENST00000566669 GPM6BQ13491 265 aa31.52■■■□□ 2.64
UBFD1-206ENST00000566669 PUS10Q3MIT2 529 aaKnown RBP31.52■■■□□ 2.64
UBFD1-206ENST00000566669 FAM160B1Q5W0V3 765 aa31.52■■■□□ 2.64
UBFD1-206ENST00000566669 CYP2W1Q8TAV3 490 aa31.52■■■□□ 2.64
UBFD1-206ENST00000566669 OSBPL7Q9BZF2 842 aa31.52■■■□□ 2.64
UBFD1-206ENST00000566669 FAM217BQ9NTX9 383 aaPredicted RBP31.52■■■□□ 2.64
UBFD1-206ENST00000566669 POTEB3A0JP26 581 aa31.51■■■□□ 2.63
UBFD1-206ENST00000566669 C5orf67F2Z3F1 127 aa31.51■■■□□ 2.63
UBFD1-206ENST00000566669 NCK2O43639 380 aa31.51■■■□□ 2.63
UBFD1-206ENST00000566669 SCG2P13521 617 aa31.51■■■□□ 2.63
UBFD1-206ENST00000566669 IGBP1P78318 339 aa31.51■■■□□ 2.63
UBFD1-206ENST00000566669 POTEBQ6S5H4 581 aa31.51■■■□□ 2.63
UBFD1-206ENST00000566669 C11orf84Q9BUA3 381 aaPredicted RBP31.51■■■□□ 2.63
UBFD1-206ENST00000566669 LMAN2LQ9H0V9 348 aa31.51■■■□□ 2.63
UBFD1-206ENST00000566669 C6orf50Q9HD87 102 aa31.51■■■□□ 2.63
UBFD1-206ENST00000566669 RNF216Q9NWF9 866 aaPredicted RBP31.51■■■□□ 2.63
UBFD1-206ENST00000566669 NAP1L2Q9ULW6 460 aaPredicted RBP31.51■■■□□ 2.63
UBFD1-206ENST00000566669 SMIM35A0A1B0GVV1 85 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 ENPP3O14638 875 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 CYP3A4P08684 503 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 ARP10275 920 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 GNA11P29992 359 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 CDC27P30260 824 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 SETQ01105 290 aaPredicted RBP31.5■■■□□ 2.63
UBFD1-206ENST00000566669 PLCB4Q15147 1175 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 LEXMQ3ZCV2 418 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 BLOC1S2Q6QNY1 142 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 ZMYND12Q9H0C1 365 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 TRPV2Q9Y5S1 764 aa31.5■■■□□ 2.63
UBFD1-206ENST00000566669 ADGRA3Q8IWK6 1321 aa31.49■■■□□ 2.63
UBFD1-206ENST00000566669 KDM3AQ9Y4C1 1321 aa31.49■■■□□ 2.63
UBFD1-206ENST00000566669 NID2Q14112 1375 aa31.49■■■□□ 2.63
UBFD1-206ENST00000566669 IGKV6D-21A0A0A0MT36 114 aa31.49■■■□□ 2.63
UBFD1-206ENST00000566669 HBP1O60381 514 aa31.49■■■□□ 2.63
UBFD1-206ENST00000566669 ITGB3BPQ13352 177 aaPredicted RBP31.49■■■□□ 2.63
UBFD1-206ENST00000566669 BICD2Q8TD16 824 aa31.49■■■□□ 2.63
UBFD1-206ENST00000566669 NECAB3Q96P71 396 aaPredicted RBP31.49■■■□□ 2.63
UBFD1-206ENST00000566669 TCEAL9Q9UHQ7 104 aa31.49■■■□□ 2.63
UBFD1-206ENST00000566669 COL1A2P08123 1366 aa31.48■■■□□ 2.63
UBFD1-206ENST00000566669 REC8O95072 547 aa31.48■■■□□ 2.63
UBFD1-206ENST00000566669 PSMA5P28066 241 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms