RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 C5P01031 1676 aa11.99□□□□□ -0.49
UBFD1-205ENST00000566136 GOLGB1Q14789 3259 aaKnown RBP11.99□□□□□ -0.49
UBFD1-205ENST00000566136 MPHOSPH10O00566 681 aaKnown RBP11.99□□□□□ -0.49
UBFD1-205ENST00000566136 PLD2O14939 933 aa11.99□□□□□ -0.49
UBFD1-205ENST00000566136 CPEP16870 476 aa11.99□□□□□ -0.49
UBFD1-205ENST00000566136 CCDC149Q6ZUS6 474 aa11.99□□□□□ -0.49
UBFD1-205ENST00000566136 SLC35G2Q8TBE7 412 aa11.99□□□□□ -0.49
UBFD1-205ENST00000566136 TBATAQ96M53 351 aa11.99□□□□□ -0.49
UBFD1-205ENST00000566136 VPS11Q9H270 941 aa11.99□□□□□ -0.49
UBFD1-205ENST00000566136 DIAPH3Q9NSV4 1193 aa11.99□□□□□ -0.49
UBFD1-205ENST00000566136 COLQQ9Y215 455 aaPredicted RBP11.99□□□□□ -0.49
UBFD1-205ENST00000566136 KPNA5O15131 536 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 H2AFYO75367 372 aaKnown RBP11.98□□□□□ -0.49
UBFD1-205ENST00000566136 PSMA3P25788 255 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 SMARCA1P28370 1054 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 UBASH3AP57075 661 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 ERVK-21P61565 698 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 HMGN5P82970 282 aaKnown RBP11.98□□□□□ -0.49
UBFD1-205ENST00000566136 CCNG2Q16589 344 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 FAM205BPQ63HN1 556 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 MCTP1Q6DN14 999 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 AMIGO3Q86WK7 504 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 USP7Q93009 1102 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 DDX11Q96FC9 970 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 TMX3Q96JJ7 454 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 ADAMTS7Q9UKP4 1686 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 TAF1LQ8IZX4 1826 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 BLACEA4D250 179 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 GRM8O00222 908 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
UBFD1-205ENST00000566136 JUNDP17535 347 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 KRT72Q14CN4 511 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 CCDC158Q5M9N0 1113 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 HGSNATQ68CP4 663 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 BTN2A1Q7KYR7 527 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 LINS1Q8NG48 757 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 XAGE3Q8WTP9 111 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 UCMAQ8WVF2 138 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 KAZALD1Q96I82 304 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 PPP1R16BQ96T49 567 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 DHX36Q9H2U1 1008 aaKnown RBP11.98□□□□□ -0.49
UBFD1-205ENST00000566136 CHRDQ9H2X0 955 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 BICC1Q9H694 974 aaKnown RBP11.98□□□□□ -0.49
UBFD1-205ENST00000566136 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 TMPRSS4Q9NRS4 437 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 RASSF1Q9NS23 344 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 NDOR1Q9UHB4 597 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 ZNF232Q9UNY5 417 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 PCDHGB5Q9Y5G0 923 aa11.98□□□□□ -0.49
UBFD1-205ENST00000566136 CTNND1O60716 968 aaKnown RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 CYP2E1P05181 493 aaPredicted RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 IGKV5-2P06315 115 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 MUTP22033 750 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 GRIK1P39086 918 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 NUCB2P80303 420 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 MTX1Q13505 466 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 CWC27Q6UX04 472 aaKnown RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 CATSPER4Q7RTX7 472 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 HSPBAP1Q96EW2 488 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 GPATCH1Q9BRR8 931 aaKnown RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 SLC13A1Q9BZW2 595 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 UNC93B1Q9H1C4 597 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 TOPORSQ9NS56 1045 aaPredicted RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 MKS1Q9NXB0 559 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 DCAF16Q9NXF7 216 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 PTPN22Q9Y2R2 807 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 GOLGA6L22H0YM25 854 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 TBX1O43435 398 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 MYCP01106 439 aaPredicted RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 ALAS1P13196 640 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 IFT88Q13099 833 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 TRIM29Q14134 588 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 INTS11Q5TA45 600 aaKnown RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 COPS6Q7L5N1 327 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 ZNF438Q7Z4V0 828 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 PPM1KQ8N3J5 372 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 C1orf127Q8N9H9 656 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 TTC16Q8NEE8 873 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 SLC10A4Q96EP9 437 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 SCLYQ96I15 445 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 RSRC1Q96IZ7 334 aaKnown RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 OXCT2Q9BYC2 517 aaPredicted RBP11.97□□□□□ -0.49
UBFD1-205ENST00000566136 SIL1Q9H173 461 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 BHMT2Q9H2M3 363 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 ZDHHC9Q9Y397 364 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
UBFD1-205ENST00000566136 COL24A1Q17RW2 1714 aa11.96□□□□□ -0.49
UBFD1-205ENST00000566136 IPO5O00410 1097 aaKnown RBP11.96□□□□□ -0.49
UBFD1-205ENST00000566136 ENC1O14682 589 aa11.96□□□□□ -0.49
UBFD1-205ENST00000566136 GIPC1O14908 333 aa11.96□□□□□ -0.49
UBFD1-205ENST00000566136 XPOTO43592 962 aaKnown RBP11.96□□□□□ -0.49
UBFD1-205ENST00000566136 CKMT1AP12532 417 aa11.96□□□□□ -0.49
UBFD1-205ENST00000566136 IFIT1BQ5T764 474 aaKnown RBP11.96□□□□□ -0.49
UBFD1-205ENST00000566136 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
UBFD1-205ENST00000566136 PGM2L1Q6PCE3 622 aa11.96□□□□□ -0.49
UBFD1-205ENST00000566136 VHLLQ6RSH7 139 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms