RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 AGO3Q9H9G7 860 aaKnown RBP19.43■□□□□ 0.7
CLK3-217ENST00000566126 LIMD1Q9UGP4 676 aa19.43■□□□□ 0.7
CLK3-217ENST00000566126 RALYQ9UKM9 306 aaKnown RBP19.43■□□□□ 0.7
CLK3-217ENST00000566126 GPR179Q6PRD1 2367 aa19.43■□□□□ 0.7
CLK3-217ENST00000566126 TRIM50Q86XT4 487 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 MCF2L2Q86YR7 1114 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 ZDHHC14Q8IZN3 488 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 NECTIN4Q96NY8 510 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 RTP3Q9BQQ7 232 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 PDCD2LQ9BRP1 358 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 UBA5Q9GZZ9 404 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 MLXIPQ9HAP2 919 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 LOXHD1Q8IVV2 1947 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 CCDC171Q6TFL3 1326 aa19.42■□□□□ 0.7
CLK3-217ENST00000566126 PKD1L2Q7Z442 2459 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 ORC4O43929 436 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 FGF18O76093 207 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 GOLGA8HP0CJ92 632 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 MYCLP12524 364 aaPredicted RBP19.41■□□□□ 0.7
CLK3-217ENST00000566126 CD52P31358 61 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 COL9A2Q14055 689 aaPredicted RBP19.41■□□□□ 0.7
CLK3-217ENST00000566126 CDC37Q16543 378 aaPredicted RBP19.41■□□□□ 0.7
CLK3-217ENST00000566126 PLPP4Q5VZY2 271 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 PDE12Q6L8Q7 609 aaKnown RBP19.41■□□□□ 0.7
CLK3-217ENST00000566126 TSHZ1Q6ZSZ6 1077 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 ADAM7Q9H2U9 754 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 PCDHB12Q9Y5F1 795 aa19.41■□□□□ 0.7
CLK3-217ENST00000566126 HIDE1A8MVS5 230 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 FGRP09769 529 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 TGFB3P10600 412 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 HSPD1P10809 573 aaKnown RBP19.4■□□□□ 0.7
CLK3-217ENST00000566126 APOBRQ0VD83 1088 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 VSIG10LQ86VR7 867 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 IL31RAQ8NI17 732 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 ZFP91Q96JP5 570 aaPredicted RBP19.4■□□□□ 0.7
CLK3-217ENST00000566126 USP26Q9BXU7 913 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 ERVK-5Q9HDB9 667 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 ECHDC1Q9NTX5 307 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 TCP11L1Q9NUJ3 509 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 TMEM260Q9NX78 707 aa19.4■□□□□ 0.7
CLK3-217ENST00000566126 STAG3L1P0CL83 205 aa19.39■□□□□ 0.69
CLK3-217ENST00000566126 ATXN1P54253 815 aaKnown RBP19.39■□□□□ 0.69
CLK3-217ENST00000566126 CES5AQ6NT32 575 aa19.39■□□□□ 0.69
CLK3-217ENST00000566126 TAF2Q6P1X5 1199 aa19.39■□□□□ 0.69
CLK3-217ENST00000566126 TDRD5Q8NAT2 981 aaKnown RBP19.39■□□□□ 0.69
CLK3-217ENST00000566126 RIN2Q8WYP3 895 aaPredicted RBP19.39■□□□□ 0.69
CLK3-217ENST00000566126 HCSTQ9UBK5 93 aa19.39■□□□□ 0.69
CLK3-217ENST00000566126 ANAPC4Q9UJX5 808 aa19.39■□□□□ 0.69
CLK3-217ENST00000566126 TELO2Q9Y4R8 837 aa19.39■□□□□ 0.69
CLK3-217ENST00000566126 CDY2AQ9Y6F7 541 aa19.39■□□□□ 0.69
CLK3-217ENST00000566126 OPLAHO14841 1288 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 SMARCA5O60264 1052 aaPredicted RBP19.38■□□□□ 0.69
CLK3-217ENST00000566126 HMMRO75330 724 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 CFBP00751 764 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 WEE2P0C1S8 567 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 SCG2P13521 617 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 HSD17B4P51659 736 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 ITIH3Q06033 890 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 TPRNQ4KMQ1 711 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 DENND4AQ7Z401 1863 aa19.38■□□□□ 0.69
CLK3-217ENST00000566126 FAM208BQ5VWN6 2430 aa19.37■□□□□ 0.69
CLK3-217ENST00000566126 NRCAMQ92823 1304 aa19.37■□□□□ 0.69
CLK3-217ENST00000566126 NOP56O00567 594 aaKnown RBP19.37■□□□□ 0.69
CLK3-217ENST00000566126 PGM5Q15124 567 aa19.37■□□□□ 0.69
CLK3-217ENST00000566126 TSHZ3Q63HK5 1081 aa19.37■□□□□ 0.69
CLK3-217ENST00000566126 THNSL1Q8IYQ7 743 aa19.37■□□□□ 0.69
CLK3-217ENST00000566126 CASP10Q92851 521 aa19.37■□□□□ 0.69
CLK3-217ENST00000566126 GPR20Q99678 358 aa19.37■□□□□ 0.69
CLK3-217ENST00000566126 FTHL17Q9BXU8 183 aa19.37■□□□□ 0.69
CLK3-217ENST00000566126 MRPL11Q9Y3B7 192 aaKnown RBP19.37■□□□□ 0.69
CLK3-217ENST00000566126 MTHFRP42898 656 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 GHRHRQ02643 423 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 QRICH1Q2TAL8 776 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 SPOUT1Q5T280 376 aaKnown RBP19.36■□□□□ 0.69
CLK3-217ENST00000566126 GPATCH4Q5T3I0 446 aaKnown RBP19.36■□□□□ 0.69
CLK3-217ENST00000566126 KIAA0319Q5VV43 1072 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 STOX1Q6ZVD7 989 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 SIX5Q8N196 739 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 PLCD3Q8N3E9 789 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 COLGALT1Q8NBJ5 622 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 SUMF1Q8NBK3 374 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 PANK1Q8TE04 598 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 DNAJB3Q8WWF6 145 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 TCF25Q9BQ70 676 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 AAASQ9NRG9 546 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 ZNF215Q9UL58 517 aaPredicted RBP19.36■□□□□ 0.69
CLK3-217ENST00000566126 HCFC2Q9Y5Z7 792 aa19.36■□□□□ 0.69
CLK3-217ENST00000566126 RRP12Q5JTH9 1297 aaKnown RBP19.35■□□□□ 0.69
CLK3-217ENST00000566126 UTP14CQ5TAP6 766 aaKnown RBP19.35■□□□□ 0.69
CLK3-217ENST00000566126 RSPH3Q86UC2 560 aa19.35■□□□□ 0.69
CLK3-217ENST00000566126 ADGRF4Q8IZF3 695 aa19.35■□□□□ 0.69
CLK3-217ENST00000566126 MRPS27Q92552 414 aaKnown RBP19.35■□□□□ 0.69
CLK3-217ENST00000566126 ENTPD7Q9NQZ7 604 aa19.35■□□□□ 0.69
CLK3-217ENST00000566126 LZTS1Q9Y250 596 aa19.35■□□□□ 0.69
CLK3-217ENST00000566126 USTQ9Y2C2 406 aa19.35■□□□□ 0.69
CLK3-217ENST00000566126 MRPS6P82932 125 aaKnown RBP19.34■□□□□ 0.69
CLK3-217ENST00000566126 ZMYM1Q5SVZ6 1142 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 METTL7BQ6UX53 244 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 CYFIP1Q7L576 1253 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 TMX1Q9H3N1 280 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms