RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 ZNF669Q96BR6 464 aaPredicted RBP5.31□□□□□ -1.56
PALB2-204ENST00000566069 NEIL1Q96FI4 390 aaPredicted RBP5.31□□□□□ -1.56
PALB2-204ENST00000566069 JAM3Q9BX67 310 aa5.31□□□□□ -1.56
PALB2-204ENST00000566069 SLC6A20Q9NP91 592 aa5.31□□□□□ -1.56
PALB2-204ENST00000566069 PDPK1O15530 556 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 CPP00450 1065 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 GFRA1P56159 465 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 PTH1RQ03431 593 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 SKIDA1Q1XH10 827 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 SV2CQ496J9 727 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 SLC35F1Q5T1Q4 408 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 VASNQ6EMK4 673 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 STPG3Q8N7X2 389 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 TMEM145Q8NBT3 493 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 PIP4K2CQ8TBX8 421 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 DEPDC7Q96QD5 511 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 PDGFDQ9GZP0 370 aaPredicted RBP5.3□□□□□ -1.56
PALB2-204ENST00000566069 SNTG2Q9NY99 539 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 ZFP69BQ9UJL9 534 aa5.3□□□□□ -1.56
PALB2-204ENST00000566069 IQCA1LA6NCM1 817 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 AGRPO00253 132 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 C1SP09871 688 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 GLRBP48167 497 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 NFE2L2Q16236 605 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 FNDC7Q5VTL7 733 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 CYP4F22Q6NT55 531 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 IL17DQ8TAD2 202 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 CSRNP2Q9H175 543 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 PPARGC1AQ9UBK2 798 aaKnown RBP5.29□□□□□ -1.56
PALB2-204ENST00000566069 TELO2Q9Y4R8 837 aa5.29□□□□□ -1.56
PALB2-204ENST00000566069 CCDC85CA6NKD9 419 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 MSCO60682 206 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 LTFP02788 710 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 FAHP16930 419 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 ACO1P21399 889 aaKnown RBP5.28□□□□□ -1.56
PALB2-204ENST00000566069 NANOS3P60323 173 aaKnown RBP5.28□□□□□ -1.56
PALB2-204ENST00000566069 PFKPQ01813 784 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 IFRD2Q12894 506 aaPredicted RBP5.28□□□□□ -1.56
PALB2-204ENST00000566069 MAMDC4Q6UXC1 1216 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 TRIM48Q8IWZ4 208 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 SGSM3Q96HU1 749 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 SRPK1Q96SB4 655 aaKnown RBP5.28□□□□□ -1.56
PALB2-204ENST00000566069 LRP2BPQ9P2M1 347 aa5.28□□□□□ -1.56
PALB2-204ENST00000566069 FAM221BA6H8Z2 402 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 RAD17O75943 681 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 GRIA2P42262 883 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 KCNJ6P48051 423 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 DUSP8Q13202 625 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 TUSC3Q13454 348 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 BMS1Q14692 1282 aaKnown RBP5.27□□□□□ -1.57
PALB2-204ENST00000566069 NOLC1Q14978 699 aaKnown RBP eCLIP5.27□□□□□ -1.57
PALB2-204ENST00000566069 RNF151Q2KHN1 245 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 CCDC144BQ3MJ40 725 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 MTERF2Q49AM1 385 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 PAN2Q504Q3 1202 aaKnown RBP5.27□□□□□ -1.57
PALB2-204ENST00000566069 CD276Q5ZPR3 534 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 DPH6Q7L8W6 267 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 LDLRAD3Q86YD5 345 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 C1orf210Q8IVY1 113 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 REXO1L1PQ8IX06 675 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 LRRC47Q8N1G4 583 aaKnown RBP5.27□□□□□ -1.57
PALB2-204ENST00000566069 CACTINQ8WUQ7 758 aaKnown RBP5.27□□□□□ -1.57
PALB2-204ENST00000566069 ZSWIM4Q9H7M6 989 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 ARHGAP20Q9P2F6 1191 aa5.27□□□□□ -1.57
PALB2-204ENST00000566069 CDK11AQ9UQ88 783 aaPredicted RBP5.27□□□□□ -1.57
PALB2-204ENST00000566069 A0A087X1B8 175 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 MATN2O00339 956 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 KRIT1O00522 736 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 MAFKO60675 156 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 FBXO21O94952 628 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 ENO2P09104 434 aaPredicted RBP5.26□□□□□ -1.57
PALB2-204ENST00000566069 MCM7P33993 719 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 HNRNPA0Q13151 305 aaKnown RBP5.26□□□□□ -1.57
PALB2-204ENST00000566069 USP10Q14694 798 aaKnown RBP5.26□□□□□ -1.57
PALB2-204ENST00000566069 OTOP3Q7RTS5 596 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 MRFAP1L1Q96HT8 127 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 TNFRSF18Q9Y5U5 241 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 SLC30A1Q9Y6M5 507 aa5.26□□□□□ -1.57
PALB2-204ENST00000566069 A0A1W2PQU0 124 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 ACOT7O00154 380 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 COL6A2P12110 1019 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 INHBCP55103 352 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 RAC3P60763 192 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 PPP2R2AP63151 447 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 SSRP1Q08945 709 aaKnown RBP5.25□□□□□ -1.57
PALB2-204ENST00000566069 PCSK4Q6UW60 755 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 SPATC1Q76KD6 591 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 NEU4Q8WWR8 484 aaPredicted RBP5.25□□□□□ -1.57
PALB2-204ENST00000566069 LARP4BQ92615 738 aaKnown RBP5.25□□□□□ -1.57
PALB2-204ENST00000566069 TACO1Q9BSH4 297 aaKnown RBP5.25□□□□□ -1.57
PALB2-204ENST00000566069 CARD11Q9BXL7 1154 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 OAZ3Q9UMX2 235 aa5.25□□□□□ -1.57
PALB2-204ENST00000566069 ZNF839A8K0R7 811 aa5.24□□□□□ -1.57
PALB2-204ENST00000566069 H0Y858 1186 aa5.24□□□□□ -1.57
PALB2-204ENST00000566069 NKRFO15226 690 aaKnown RBP eCLIP5.24□□□□□ -1.57
PALB2-204ENST00000566069 IGSF3O75054 1194 aa5.24□□□□□ -1.57
PALB2-204ENST00000566069 CR2P20023 1033 aa5.24□□□□□ -1.57
PALB2-204ENST00000566069 TOP3AQ13472 1001 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms