RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 GHRP10912 638 aa14.72□□□□□ -0.05
RNF40-208ENST00000565995 TSHZ1Q6ZSZ6 1077 aa14.72□□□□□ -0.05
RNF40-208ENST00000565995 TRIM67Q6ZTA4 783 aa14.72□□□□□ -0.05
RNF40-208ENST00000565995 RSPH3Q86UC2 560 aa14.72□□□□□ -0.05
RNF40-208ENST00000565995 RTN4RL1Q86UN2 441 aaPredicted RBP14.72□□□□□ -0.05
RNF40-208ENST00000565995 CMTR2Q8IYT2 770 aaKnown RBP14.72□□□□□ -0.05
RNF40-208ENST00000565995 EFHBQ8N7U6 833 aa14.72□□□□□ -0.05
RNF40-208ENST00000565995 SMRP1Q8NCR6 262 aa14.72□□□□□ -0.05
RNF40-208ENST00000565995 SPPL3Q8TCT6 385 aa14.72□□□□□ -0.05
RNF40-208ENST00000565995 ALG13Q9NP73 1137 aaKnown RBP14.72□□□□□ -0.05
RNF40-208ENST00000565995 RTEL1Q9NZ71 1219 aa14.72□□□□□ -0.05
RNF40-208ENST00000565995 GSTTP1A0A1W2PQM5 241 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 MEIS2O14770 477 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 ITGB1P05556 798 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 DNAJB1P25685 340 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 SMARCA1P28370 1054 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 TCF7P36402 384 aaPredicted RBP14.71□□□□□ -0.05
RNF40-208ENST00000565995 IRX6P78412 446 aaPredicted RBP14.71□□□□□ -0.05
RNF40-208ENST00000565995 NUCB1Q02818 461 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 CLUL1Q15846 466 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 UTP14CQ5TAP6 766 aaKnown RBP14.71□□□□□ -0.05
RNF40-208ENST00000565995 CHD1LQ86WJ1 897 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 PRSS33Q8NF86 280 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 LINC01599Q8WXQ3 324 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 PPP2R3CQ969Q6 453 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 GPRASP2Q96D09 838 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 MAP3K14Q99558 947 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 FTHL17Q9BXU8 183 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 IGFLR1Q9H665 355 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 ERAP1Q9NZ08 941 aa14.71□□□□□ -0.05
RNF40-208ENST00000565995 TMEM221A6NGB7 291 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 M0R296 226 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 ATP9AO75110 1047 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 KCNA2P16389 499 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 PTPN5P54829 565 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 ZXDAP98168 799 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 GRIK4Q16099 956 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 NLRX1Q86UT6 975 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 DNAJB3Q8WWF6 145 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 SEPT1Q8WYJ6 367 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 CDHR1Q96JP9 859 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 IL25Q9H293 177 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 AGO3Q9H9G7 860 aaKnown RBP14.7□□□□□ -0.06
RNF40-208ENST00000565995 SENP2Q9HC62 589 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 TUBE1Q9UJT0 475 aa14.7□□□□□ -0.06
RNF40-208ENST00000565995 MRPL42Q9Y6G3 142 aaKnown RBP14.7□□□□□ -0.06
RNF40-208ENST00000565995 MAFGO15525 162 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 MRPS6P82932 125 aaKnown RBP14.69□□□□□ -0.06
RNF40-208ENST00000565995 PPFIA1Q13136 1202 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 IER5LQ5T953 404 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 ADGRD2Q7Z7M1 963 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 NPAS4Q8IUM7 802 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 KLHL23Q8NBE8 558 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 PBXIP1Q96AQ6 731 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 SNX27Q96L92 541 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 PHOX2BQ99453 314 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 SPZ1Q9BXG8 430 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 RWDD1Q9H446 243 aaPredicted RBP14.69□□□□□ -0.06
RNF40-208ENST00000565995 SMARCAD1Q9H4L7 1026 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 CDY2AQ9Y6F7 541 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 VPS13AQ96RL7 3174 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 DMDP11532 3685 aa14.69□□□□□ -0.06
RNF40-208ENST00000565995 ZFHX2Q9C0A1 2572 aaPredicted RBP14.69□□□□□ -0.06
RNF40-208ENST00000565995 KDM3AQ9Y4C1 1321 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 RRN3P2A6NIE6 340 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 IFIT3O14879 490 aaKnown RBP14.68□□□□□ -0.06
RNF40-208ENST00000565995 GLP2RO95838 553 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 NDUFV1P49821 464 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 TRDNQ13061 729 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 IER5Q5VY09 327 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 USP17L6PQ6QN14 398 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 FBXL6Q8N531 539 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 SMARCC2Q8TAQ2 1214 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 IGDCC4Q8TDY8 1250 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 ATP8B4Q8TF62 1192 aa14.68□□□□□ -0.06
RNF40-208ENST00000565995 IGSF9BQ9UPX0 1349 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 WDR87Q6ZQQ6 2873 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 ERICH2A1L162 156 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 FSD2A1L4K1 749 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 ST18O60284 1047 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 CYP21A2P08686 494 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 STAG3L1P0CL83 205 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 ATF7P17544 494 aaPredicted RBP14.67□□□□□ -0.06
RNF40-208ENST00000565995 ITGB5P18084 799 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 CD52P31358 61 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 UBE3AQ05086 875 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 TCF15Q12870 199 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 WTAPQ15007 396 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 B4GALNT3Q6L9W6 998 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 POF1BQ8WVV4 589 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 SUSD6Q92537 303 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 CUL5Q93034 780 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 PHF7Q9BWX1 381 aaPredicted RBP14.67□□□□□ -0.06
RNF40-208ENST00000565995 PADI3Q9ULW8 664 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 PCDHA2Q9Y5H9 948 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 UBIAD1Q9Y5Z9 338 aa14.67□□□□□ -0.06
RNF40-208ENST00000565995 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
RNF40-208ENST00000565995 INSRRP14616 1297 aa14.66□□□□□ -0.06
RNF40-208ENST00000565995 SP4Q02446 784 aa14.66□□□□□ -0.06
RNF40-208ENST00000565995 SIGLEC14Q08ET2 396 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms