RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 BCCIPQ9P287 314 aaKnown RBP eCLIP6.65□□□□□ -1.34
CHD9-214ENST00000565119 KRIT1O00522 736 aa6.64□□□□□ -1.35
CHD9-214ENST00000565119 FOXN1O15353 648 aa6.64□□□□□ -1.35
CHD9-214ENST00000565119 PPM1GO15355 546 aaPredicted RBP6.64□□□□□ -1.35
CHD9-214ENST00000565119 POLD1P28340 1107 aa6.64□□□□□ -1.35
CHD9-214ENST00000565119 PAN2Q504Q3 1202 aaKnown RBP6.64□□□□□ -1.35
CHD9-214ENST00000565119 CD276Q5ZPR3 534 aa6.64□□□□□ -1.35
CHD9-214ENST00000565119 FAM9AQ8IZU1 332 aaPredicted RBP6.64□□□□□ -1.35
CHD9-214ENST00000565119 NR2E1Q9Y466 385 aa6.64□□□□□ -1.35
CHD9-214ENST00000565119 ZNF839A8K0R7 811 aa6.63□□□□□ -1.35
CHD9-214ENST00000565119 ENO2P09104 434 aaPredicted RBP6.63□□□□□ -1.35
CHD9-214ENST00000565119 NAT2P11245 290 aa6.63□□□□□ -1.35
CHD9-214ENST00000565119 MSX2P35548 267 aaPredicted RBP6.63□□□□□ -1.35
CHD9-214ENST00000565119 RRADP55042 308 aa6.63□□□□□ -1.35
CHD9-214ENST00000565119 CASP7P55210 303 aa6.63□□□□□ -1.35
CHD9-214ENST00000565119 TOP3AQ13472 1001 aaPredicted RBP6.63□□□□□ -1.35
CHD9-214ENST00000565119 JAM3Q9BX67 310 aa6.63□□□□□ -1.35
CHD9-214ENST00000565119 C12orf65Q9H3J6 166 aaKnown RBP6.63□□□□□ -1.35
CHD9-214ENST00000565119 AURKAIP1Q9NWT8 199 aaPredicted RBP6.63□□□□□ -1.35
CHD9-214ENST00000565119 LTFP02788 710 aa6.62□□□□□ -1.35
CHD9-214ENST00000565119 RPS19P39019 145 aaKnown RBP6.62□□□□□ -1.35
CHD9-214ENST00000565119 KRTAP10-9P60411 292 aa6.62□□□□□ -1.35
CHD9-214ENST00000565119 FANCCQ00597 558 aa6.62□□□□□ -1.35
CHD9-214ENST00000565119 TUSC3Q13454 348 aa6.62□□□□□ -1.35
CHD9-214ENST00000565119 TBR1Q16650 682 aa6.62□□□□□ -1.35
CHD9-214ENST00000565119 GIPC2Q8TF65 315 aa6.62□□□□□ -1.35
CHD9-214ENST00000565119 HECAQ9UBI9 543 aaPredicted RBP6.62□□□□□ -1.35
CHD9-214ENST00000565119 ESYT3A0FGR9 886 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 CUTAO60888 179 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 ITGAVP06756 1048 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 GJA4P35212 333 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 ADRA1BP35368 520 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 RPUSD2Q8IZ73 545 aaKnown RBP6.61□□□□□ -1.35
CHD9-214ENST00000565119 CFHR4Q92496 578 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 SHDQ96IW2 340 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 BCL2L13Q9BXK5 485 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 PLA2G3Q9NZ20 509 aa6.61□□□□□ -1.35
CHD9-214ENST00000565119 CPP00450 1065 aa6.6□□□□□ -1.35
CHD9-214ENST00000565119 KRTAP10-11P60412 298 aa6.6□□□□□ -1.35
CHD9-214ENST00000565119 ZC3H6P61129 1189 aaKnown RBP6.6□□□□□ -1.35
CHD9-214ENST00000565119 PAK2Q13177 524 aa6.6□□□□□ -1.35
CHD9-214ENST00000565119 NFYCQ13952 458 aa6.6□□□□□ -1.35
CHD9-214ENST00000565119 ZNF326Q5BKZ1 582 aaKnown RBP6.6□□□□□ -1.35
CHD9-214ENST00000565119 ZMAT1Q5H9K5 638 aa6.6□□□□□ -1.35
CHD9-214ENST00000565119 GLCCI1Q86VQ1 547 aa6.6□□□□□ -1.35
CHD9-214ENST00000565119 PDGFDQ9GZP0 370 aaPredicted RBP6.6□□□□□ -1.35
CHD9-214ENST00000565119 DDX41Q9UJV9 622 aaKnown RBP6.6□□□□□ -1.35
CHD9-214ENST00000565119 TELO2Q9Y4R8 837 aa6.6□□□□□ -1.35
CHD9-214ENST00000565119 KCNJ6P48051 423 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 FSTL1Q12841 308 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 CCDC27Q2M243 656 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 LAIR1Q6GTX8 287 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 ZNF227Q86WZ6 799 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 TMPRSS6Q8IU80 811 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 FAM169BQ8N8A8 192 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 TMEM145Q8NBT3 493 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 C1orf159Q96HA4 380 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 PPARGC1AQ9UBK2 798 aaKnown RBP6.59□□□□□ -1.35
CHD9-214ENST00000565119 NPFFR2Q9Y5X5 522 aa6.59□□□□□ -1.35
CHD9-214ENST00000565119 ARHGAP6O43182 974 aa6.58□□□□□ -1.36
CHD9-214ENST00000565119 GFRA1P56159 465 aa6.58□□□□□ -1.36
CHD9-214ENST00000565119 MRPS21P82921 87 aaKnown RBP6.58□□□□□ -1.36
CHD9-214ENST00000565119 CCDC140Q96MF4 163 aa6.58□□□□□ -1.36
CHD9-214ENST00000565119 PARPBPQ9NWS1 579 aa6.58□□□□□ -1.36
CHD9-214ENST00000565119 GIT1Q9Y2X7 761 aa6.58□□□□□ -1.36
CHD9-214ENST00000565119 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
CHD9-214ENST00000565119 NCAPHQ15003 741 aa6.57□□□□□ -1.36
CHD9-214ENST00000565119 OTOP3Q7RTS5 596 aa6.57□□□□□ -1.36
CHD9-214ENST00000565119 SGMS1Q86VZ5 419 aa6.57□□□□□ -1.36
CHD9-214ENST00000565119 CERS3Q8IU89 383 aa6.57□□□□□ -1.36
CHD9-214ENST00000565119 SCYL1Q96KG9 808 aa6.57□□□□□ -1.36
CHD9-214ENST00000565119 PUF60Q9UHX1 559 aaKnown RBP6.57□□□□□ -1.36
CHD9-214ENST00000565119 UNCXA6NJT0 531 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 KRTAP29-1A8MX34 341 aaPredicted RBP6.56□□□□□ -1.36
CHD9-214ENST00000565119 MSCO60682 206 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 PDE6AP16499 860 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 PROZP22891 400 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 ETV4P43268 484 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 SLC25A3Q00325 362 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
CHD9-214ENST00000565119 TICAM2Q86XR7 235 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 GPR135Q8IZ08 494 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 GPR150Q8NGU9 434 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 UHMK1Q8TAS1 419 aaKnown RBP6.56□□□□□ -1.36
CHD9-214ENST00000565119 NTN5Q8WTR8 489 aaPredicted RBP6.56□□□□□ -1.36
CHD9-214ENST00000565119 SPATA32Q96LK8 384 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 PSMD1Q99460 953 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 KIAA1683Q9H0B3 1180 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 SLC39A2Q9NP94 309 aa6.56□□□□□ -1.36
CHD9-214ENST00000565119 TMEM191CA6NGB0 347 aa6.55□□□□□ -1.36
CHD9-214ENST00000565119 ACOT7O00154 380 aa6.55□□□□□ -1.36
CHD9-214ENST00000565119 PEX11BO96011 259 aa6.55□□□□□ -1.36
CHD9-214ENST00000565119 COL6A2P12110 1019 aa6.55□□□□□ -1.36
CHD9-214ENST00000565119 SLC35F1Q5T1Q4 408 aa6.55□□□□□ -1.36
CHD9-214ENST00000565119 LARP4Q71RC2 724 aaKnown RBP eCLIP6.55□□□□□ -1.36
CHD9-214ENST00000565119 MICAL1Q8TDZ2 1067 aa6.55□□□□□ -1.36
CHD9-214ENST00000565119 GPRC5BQ9NZH0 403 aa6.55□□□□□ -1.36
CHD9-214ENST00000565119 CADPSQ9ULU8 1353 aa6.55□□□□□ -1.36
CHD9-214ENST00000565119 CLSTN1O94985 981 aa6.54□□□□□ -1.36
CHD9-214ENST00000565119 HHEXQ03014 270 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms