RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 LRRTM3Q86VH5 581 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 WNK4Q96J92 1243 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 TMEM209Q96SK2 561 aa6.14□□□□□ -1.43
PALB2-203ENST00000565038 INTS7Q9NVH2 962 aaKnown RBP6.14□□□□□ -1.43
PALB2-203ENST00000565038 FAM83GA6ND36 823 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 ZNF839A8K0R7 811 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 ZBTB48P10074 688 aaPredicted RBP6.13□□□□□ -1.43
PALB2-203ENST00000565038 RPL13P26373 211 aaKnown RBP6.13□□□□□ -1.43
PALB2-203ENST00000565038 GJA4P35212 333 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 GYS2P54840 703 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 MLLT6P55198 1093 aaPredicted RBP6.13□□□□□ -1.43
PALB2-203ENST00000565038 IRF9Q00978 393 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 TMEM132BQ14DG7 1078 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 PLEKHG4Q58EX7 1191 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 PRR31Q5SQ13 230 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 PRAMEF18Q5VWM3 479 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 KRTAP1-3Q8IUG1 177 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 DTX3Q8N9I9 347 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 MARCH10Q8NA82 808 aaPredicted RBP6.13□□□□□ -1.43
PALB2-203ENST00000565038 CHST14Q8NCH0 376 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 CABP5Q9NP86 173 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 DLL4Q9NR61 685 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 ARHGAP28Q9P2N2 729 aa6.13□□□□□ -1.43
PALB2-203ENST00000565038 PTPDC1A2A3K4 754 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 CBX4O00257 560 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 MMEP08473 750 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 IL13P35225 146 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 PCBP1Q15365 356 aaKnown RBP eCLIP6.12□□□□□ -1.43
PALB2-203ENST00000565038 MCTP2Q6DN12 878 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 OTOP1Q7RTM1 612 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 FEZF2Q8TBJ5 459 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 DDX1Q92499 740 aaKnown RBP6.12□□□□□ -1.43
PALB2-203ENST00000565038 MFSD3Q96ES6 412 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 TARS2Q9BW92 718 aaKnown RBP6.12□□□□□ -1.43
PALB2-203ENST00000565038 BOCQ9BWV1 1114 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 MTFR1LQ9H019 292 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 ZCCHC4Q9H5U6 513 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 KCNH7Q9NS40 1196 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 ARHGAP20Q9P2F6 1191 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 ZFP69BQ9UJL9 534 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 PLAAQ9Y263 795 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 B3GALT1Q9Y5Z6 326 aa6.12□□□□□ -1.43
PALB2-203ENST00000565038 HIP1RO75146 1068 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 FBXO21O94952 628 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 HSD3B2P26439 372 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 MC4RP32245 332 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 KCNC1P48547 511 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 ARHGAP44Q17R89 818 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 SKOR2Q2VWA4 1001 aaPredicted RBP6.11□□□□□ -1.43
PALB2-203ENST00000565038 TRMT10BQ6PF06 316 aaKnown RBP6.11□□□□□ -1.43
PALB2-203ENST00000565038 ZDHHC14Q8IZN3 488 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 STPG3Q8N7X2 389 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 IGDCC4Q8TDY8 1250 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 DLG3Q92796 817 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 KCNC2Q96PR1 638 aa6.11□□□□□ -1.43
PALB2-203ENST00000565038 TACO1Q9BSH4 297 aaKnown RBP6.11□□□□□ -1.43
PALB2-203ENST00000565038 RASSF10A6NK89 507 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 DVL2O14641 736 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 SASH1O94885 1247 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 IL18BPO95998 194 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 INHBBP09529 407 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 MYCLP1P12525 358 aaPredicted RBP6.1□□□□□ -1.43
PALB2-203ENST00000565038 ZNF28P17035 718 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 PTGS1P23219 599 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 KIF11P52732 1056 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 NT5DC1Q5TFE4 455 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 ZNF761Q86XN6 746 aaPredicted RBP6.1□□□□□ -1.43
PALB2-203ENST00000565038 NXPE1Q8N323 547 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 TXNDC5Q8NBS9 432 aaKnown RBP6.1□□□□□ -1.43
PALB2-203ENST00000565038 ADAMTS17Q8TE56 1095 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 ASB15Q8WXK1 588 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 ZCCHC14Q8WYQ9 949 aaKnown RBP6.1□□□□□ -1.43
PALB2-203ENST00000565038 L2HGDHQ9H9P8 463 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 PARD6AQ9NPB6 346 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 LUC7LQ9NQ29 371 aaKnown RBP6.1□□□□□ -1.43
PALB2-203ENST00000565038 UCKL1Q9NWZ5 548 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 BTBD7Q9P203 1132 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 B4GALT6Q9UBX8 382 aa6.1□□□□□ -1.43
PALB2-203ENST00000565038 PRAMEF22A3QJZ6 481 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 OTOL1A6NHN0 477 aaPredicted RBP6.09□□□□□ -1.43
PALB2-203ENST00000565038 ZNF891A8MT65 544 aaPredicted RBP6.09□□□□□ -1.43
PALB2-203ENST00000565038 FOXP2O15409 715 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 CYP7B1O75881 506 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 AOAHP28039 575 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 HERVK_113P62684 666 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 RGL3Q3MIN7 710 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 CATSPEREQ5SY80 951 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 SP8Q8IXZ3 490 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 ERCC4Q92889 916 aaPredicted RBP6.09□□□□□ -1.43
PALB2-203ENST00000565038 GBP4Q96PP9 640 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 WRNIP1Q96S55 665 aa6.09□□□□□ -1.43
PALB2-203ENST00000565038 A0A087X0B3 334 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 CYP1A1P04798 512 aaPredicted RBP6.08□□□□□ -1.44
PALB2-203ENST00000565038 COL6A1P12109 1028 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 SMAD2Q15796 467 aaKnown RBP6.08□□□□□ -1.44
PALB2-203ENST00000565038 SEPT7Q16181 437 aaKnown RBP6.08□□□□□ -1.44
PALB2-203ENST00000565038 FBLN7Q53RD9 439 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 LRSAM1Q6UWE0 723 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 HIPK4Q8NE63 616 aa6.08□□□□□ -1.44
PALB2-203ENST00000565038 SLKQ9H2G2 1235 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms