RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 IRF2BP2Q7Z5L9 587 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 CATSPER3Q86XQ3 398 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 BCAS4Q8TDM0 211 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 ANO3Q9BYT9 981 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 POLD4Q9HCU8 107 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 HDAC9Q9UKV0 1011 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 ARFGEF1Q9Y6D6 1849 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 FRMD3A2A2Y4 597 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 ZNF571Q7Z3V5 609 aaPredicted RBP16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 ZFPM1Q8IX07 1006 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 IQCKQ8N0W5 287 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 CASKIN2Q8WXE0 1202 aa16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
GTF3C1-205ENST00000564747 EIF3HO15372 352 aaKnown RBP eCLIP16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 USP11P51784 963 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 NFIAQ12857 509 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 PABPC4Q13310 644 aaKnown RBP eCLIP16.98■□□□□ 0.315e-6■■■■■ 27.5
GTF3C1-205ENST00000564747 NNTQ13423 1086 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 PTPROQ16827 1216 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 EDRF1Q3B7T1 1238 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 DPY19L2P1Q6NXN4 242 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 GOLGB1Q14789 3259 aaKnown RBP16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 ZNF233A6NK53 670 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 FAM196BA6NMK8 535 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 HOXD13P35453 343 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 PDE4CQ08493 712 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 GIT2Q14161 759 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 CDC42EP5Q6NZY7 148 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 EFCAB13Q8IY85 973 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 BCAS3Q9H6U6 928 aa16.98■□□□□ 0.31
GTF3C1-205ENST00000564747 UCHL3P15374 230 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 SNAP25P60880 206 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 PAK2Q13177 524 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 CDC37Q16543 378 aaPredicted RBP16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 PRR16Q569H4 304 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 CFAP58Q5T655 872 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 ICE2Q659A1 982 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 KLHL7Q8IXQ5 586 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 USP38Q8NB14 1042 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 PIK3R5Q8WYR1 880 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 NAP1L4Q99733 375 aaKnown RBP16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 ARMCX3Q9UH62 379 aaPredicted RBP16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 CYP3A7-CYP3A51PA0A087WV96 503 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 KCNK3O14649 394 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 MEIS2O14770 477 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 RAD51CO43502 376 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 CYP3A7P24462 503 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 HOXA10P31260 410 aaPredicted RBP16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 ATP1A2P50993 1020 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 SPIRE1Q08AE8 756 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 SPAG5Q96R06 1193 aa16.97■□□□□ 0.31
GTF3C1-205ENST00000564747 PITPNM2Q9BZ72 1349 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 PDCLQ13371 301 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 SFR1Q86XK3 245 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 REEP2Q9BRK0 252 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 DNAJC18Q9H819 358 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 SPATA31C1P0DKV0 1188 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 MYBP10242 640 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 PON1P27169 355 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 ARHGAP4P98171 946 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 RPS6KA1Q15418 735 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 KCTD19Q17RG1 926 aaPredicted RBP16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 KNOP1Q1ED39 458 aaKnown RBP16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 SLFN12Q8IYM2 578 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 ETNPPLQ8TBG4 499 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 RBM46Q8TBY0 533 aaKnown RBP16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 MBOAT7Q96N66 472 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 COA1Q9GZY4 146 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 MYH4Q9Y623 1939 aa16.96■□□□□ 0.31
GTF3C1-205ENST00000564747 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.3
GTF3C1-205ENST00000564747 AFPP02771 609 aaKnown RBP16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 EEF2P13639 858 aaKnown RBP16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 SKOR1P84550 965 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 EXOC3L4Q17RC7 722 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 APOBEC3HQ6NTF7 200 aaKnown RBP16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 PROCA1Q8NCQ7 364 aaPredicted RBP16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 DNM3Q9UQ16 869 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 RSPH10B2B2RC85 870 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 EBAG9O00559 213 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 AKAP3O75969 853 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 RSPH10BP0C881 870 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 CACNB3P54284 484 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 DDR1Q08345 913 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 FRMD5Q7Z6J6 570 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 TAF4BQ92750 862 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 CRAMP1Q96RY5 1269 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 FAM107BQ9H098 131 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 NAGPAQ9UK23 515 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 TMEM59LQ9UK28 342 aa16.95■□□□□ 0.3
GTF3C1-205ENST00000564747 CASP4P49662 377 aa16.94■□□□□ 0.3
GTF3C1-205ENST00000564747 GTF2A1P52655 376 aaPredicted RBP16.94■□□□□ 0.3
GTF3C1-205ENST00000564747 ALKBH5Q6P6C2 394 aaKnown RBP16.94■□□□□ 0.3
GTF3C1-205ENST00000564747 CRYGNQ8WXF5 182 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms