RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 CYP26C1Q6V0L0 522 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 PDCL2Q8N4E4 241 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 CPLX3Q8WVH0 158 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 NUP88Q99567 741 aaPredicted RBP8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 ANO3Q9BYT9 981 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 ARHGEF10LQ9HCE6 1279 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 ABHD10Q9NUJ1 306 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 CGNQ9P2M7 1197 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 DNAI1Q9UI46 699 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 ZNF215Q9UL58 517 aaPredicted RBP8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 POTEMA6NI47 508 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 PLA2G6O60733 806 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 STK10O94804 968 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 GH2P01242 217 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 CIITAP33076 1130 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 KRT9P35527 623 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 GCGRP47871 477 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 TUBB2AQ13885 445 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 DLGAP5Q15398 846 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 Q4G0T1 1027 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 FIGNQ5HY92 759 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 ANKRD40Q6AI12 368 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 USP17L6PQ6QN14 398 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 TOGARAM2Q6ZUX3 1019 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 NUDT18Q6ZVK8 323 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 AGBL3Q8NEM8 1001 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 OR8K1Q8NGG5 319 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 FAM20AQ96MK3 541 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 PLCD4Q9BRC7 762 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 TUBGCP2Q9BSJ2 902 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 TUBB2BQ9BVA1 445 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 RBCK1Q9BYM8 510 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 CAPN11Q9UMQ6 739 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 TMX2Q9Y320 296 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 LUC7L2Q9Y383 392 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 ARFGEF1Q9Y6D6 1849 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 DNAJC6O75061 913 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 KIF20AO95235 890 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 GDF11O95390 407 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 CYP3A4P08684 503 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 FCER1AP12319 257 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 XRCC5P13010 732 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 CASQ1P31415 396 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 APLP1P51693 650 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 TBC1D8BQ0IIM8 1120 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 HAUS3Q68CZ6 603 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 RAD9BQ6WBX8 426 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 FAM83AQ86UY5 434 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 CREBRFQ8IUR6 639 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 KIAA0895Q8NCT3 520 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 ERGIC2Q96RQ1 377 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 MYO1AQ9UBC5 1043 aa8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 ZNF70Q9UC06 446 aaPredicted RBP8.05□□□□□ -1.12
HERPUD1-209ENST00000564678 PITPNM2Q9BZ72 1349 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 SPDYE3A6NKU9 549 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 PSMD14O00487 310 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 COBLO75128 1261 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 SREBF1P36956 1147 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 STAT2P52630 851 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 GNG11P61952 73 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 FOXD4Q12950 439 aaPredicted RBP8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 IKQ13123 557 aaPredicted RBP8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 DSC3Q14574 896 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 TSHZ1Q6ZSZ6 1077 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 PHTF2Q8N3S3 785 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 ERMNQ8TAM6 284 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 CHURC1Q8WUH1 139 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 DNAJC19Q96DA6 116 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 RNPC3Q96LT9 517 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 DNAJC7Q99615 494 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 NUDT12Q9BQG2 462 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 SH2D4AQ9H788 454 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 SPC25Q9HBM1 224 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 SLC39A2Q9NP94 309 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 A0A1W2PQJ5 194 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 TTC26A0AVF1 554 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 EIF3JO75822 258 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 DNAJB2P25686 324 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 USP46P62068 366 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 TUBB4BP68371 445 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 MAP3K10Q02779 954 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 SF3B2Q13435 895 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 FKBP15Q5T1M5 1219 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 ARHGAP27Q6ZUM4 889 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 DYMQ7RTS9 669 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 CCDC65Q8IXS2 484 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 ETNPPLQ8TBG4 499 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 CNOT6LQ96LI5 555 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 FEZ1Q99689 392 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 TSG101Q99816 390 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 NOC4LQ9BVI4 516 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 CCDC94Q9BW85 323 aaPredicted RBP8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 SEMA6BQ9H3T3 888 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 TSKSQ9UJT2 592 aa8.04□□□□□ -1.12
HERPUD1-209ENST00000564678 A0A1W2PRG0 241 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 EFCAB8A8MWE9 144 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 TCP10L2B9ZVM9 353 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms