RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SAMD11Q96NU1 681 aa27.3■■□□□ 1.96
NME3-206ENST00000564252 KLF18A0A0U1RQI7 1052 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 GOLGA8AA7E2F4 631 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 GOLGA8BA8MQT2 603 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 CDC27P30260 824 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 ADCY7P51828 1080 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 KRT32Q14532 448 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 LPIN1Q14693 890 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 RSPH3Q86UC2 560 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 DNAJB3Q8WWF6 145 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 ANO3Q9BYT9 981 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 BARHL2Q9NY43 387 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 NFASCO94856 1347 aa27.29■■□□□ 1.96
NME3-206ENST00000564252 NLRC5Q86WI3 1866 aa27.28■■□□□ 1.96
NME3-206ENST00000564252 ARP10275 920 aa27.28■■□□□ 1.96
NME3-206ENST00000564252 RCAN1P53805 252 aa27.28■■□□□ 1.96
NME3-206ENST00000564252 CEP55Q53EZ4 464 aa27.28■■□□□ 1.96
NME3-206ENST00000564252 SMCO2A6NFE2 343 aa27.27■■□□□ 1.96
NME3-206ENST00000564252 INSRRP14616 1297 aa27.27■■□□□ 1.96
NME3-206ENST00000564252 CLK2P49760 499 aaKnown RBP27.27■■□□□ 1.96
NME3-206ENST00000564252 IGBP1P78318 339 aa27.27■■□□□ 1.96
NME3-206ENST00000564252 ITGB3BPQ13352 177 aaPredicted RBP27.27■■□□□ 1.96
NME3-206ENST00000564252 ZBTB10Q96DT7 871 aa27.27■■□□□ 1.96
NME3-206ENST00000564252 SDF4Q9BRK5 362 aa27.27■■□□□ 1.96
NME3-206ENST00000564252 AGO4Q9HCK5 861 aaKnown RBP27.27■■□□□ 1.96
NME3-206ENST00000564252 TMEM260Q9NX78 707 aa27.27■■□□□ 1.96
NME3-206ENST00000564252 RRN3P2A6NIE6 340 aa27.26■■□□□ 1.95
NME3-206ENST00000564252 SREBF1P36956 1147 aa27.26■■□□□ 1.95
NME3-206ENST00000564252 ACTR2P61160 394 aa27.26■■□□□ 1.95
NME3-206ENST00000564252 AP3B2Q13367 1082 aa27.26■■□□□ 1.95
NME3-206ENST00000564252 FBXO47Q5MNV8 452 aa27.26■■□□□ 1.95
NME3-206ENST00000564252 TMEM192Q8IY95 271 aa27.26■■□□□ 1.95
NME3-206ENST00000564252 MRPL38Q96DV4 380 aaKnown RBP27.26■■□□□ 1.95
NME3-206ENST00000564252 AZI2Q9H6S1 392 aa27.26■■□□□ 1.95
NME3-206ENST00000564252 UBE2ZQ9H832 354 aaPredicted RBP27.26■■□□□ 1.95
NME3-206ENST00000564252 CDY2AQ9Y6F7 541 aa27.26■■□□□ 1.95
NME3-206ENST00000564252 RALGAPA2Q2PPJ7 1873 aa27.25■■□□□ 1.95
NME3-206ENST00000564252 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.25■■□□□ 1.95
NME3-206ENST00000564252 H3BNC9 293 aa27.25■■□□□ 1.95
NME3-206ENST00000564252 MEIS1O00470 390 aa27.25■■□□□ 1.95
NME3-206ENST00000564252 HMGB1P09429 215 aaKnown RBP27.25■■□□□ 1.95
NME3-206ENST00000564252 MRPS6P82932 125 aaKnown RBP27.25■■□□□ 1.95
NME3-206ENST00000564252 GLT8D2Q9H1C3 349 aa27.25■■□□□ 1.95
NME3-206ENST00000564252 RPLP2P05387 115 aaKnown RBP27.24■■□□□ 1.95
NME3-206ENST00000564252 CPA1P15085 419 aa27.24■■□□□ 1.95
NME3-206ENST00000564252 ADD1P35611 737 aaKnown RBP27.24■■□□□ 1.95
NME3-206ENST00000564252 PLCB4Q15147 1175 aa27.24■■□□□ 1.95
NME3-206ENST00000564252 TSHZ1Q6ZSZ6 1077 aa27.24■■□□□ 1.95
NME3-206ENST00000564252 PLPPR4Q7Z2D5 763 aa27.24■■□□□ 1.95
NME3-206ENST00000564252 KCNB2Q92953 911 aa27.24■■□□□ 1.95
NME3-206ENST00000564252 IL17RAQ96F46 866 aa27.24■■□□□ 1.95
NME3-206ENST00000564252 TRPC6Q9Y210 931 aa27.24■■□□□ 1.95
NME3-206ENST00000564252 ENPP3O14638 875 aa27.23■■□□□ 1.95
NME3-206ENST00000564252 ATG7O95352 703 aa27.23■■□□□ 1.95
NME3-206ENST00000564252 GPM6BQ13491 265 aa27.23■■□□□ 1.95
NME3-206ENST00000564252 PTPROQ16827 1216 aa27.23■■□□□ 1.95
NME3-206ENST00000564252 FAM49AQ9H0Q0 323 aaPredicted RBP27.23■■□□□ 1.95
NME3-206ENST00000564252 RC3H2Q9HBD1 1191 aaKnown RBP27.23■■□□□ 1.95
NME3-206ENST00000564252 COL9A1P20849 921 aa27.22■■□□□ 1.95
NME3-206ENST00000564252 METAP2P50579 478 aaKnown RBP eCLIP27.22■■□□□ 1.95
NME3-206ENST00000564252 STAT5BP51692 787 aa27.22■■□□□ 1.95
NME3-206ENST00000564252 APOBRQ0VD83 1088 aa27.22■■□□□ 1.95
NME3-206ENST00000564252 PFKFB3Q16875 520 aaPredicted RBP27.22■■□□□ 1.95
NME3-206ENST00000564252 NIPA1Q7RTP0 329 aa27.22■■□□□ 1.95
NME3-206ENST00000564252 TRAPPC12Q8WVT3 735 aa27.22■■□□□ 1.95
NME3-206ENST00000564252 TNPO1Q92973 898 aaKnown RBP27.22■■□□□ 1.95
NME3-206ENST00000564252 AGO3Q9H9G7 860 aaKnown RBP27.22■■□□□ 1.95
NME3-206ENST00000564252 NAP1L2Q9ULW6 460 aaPredicted RBP27.22■■□□□ 1.95
NME3-206ENST00000564252 TTC3P53804 2025 aa27.21■■□□□ 1.95
NME3-206ENST00000564252 IGKV6D-21A0A0A0MT36 114 aa27.21■■□□□ 1.95
NME3-206ENST00000564252 LINC00271P0C7V0 271 aa27.21■■□□□ 1.95
NME3-206ENST00000564252 FIBCD1Q8N539 461 aa27.21■■□□□ 1.95
NME3-206ENST00000564252 CRYGNQ8WXF5 182 aa27.21■■□□□ 1.95
NME3-206ENST00000564252 PCDHA2Q9Y5H9 948 aa27.21■■□□□ 1.95
NME3-206ENST00000564252 NID2Q14112 1375 aa27.21■■□□□ 1.95
NME3-206ENST00000564252 ADGRA3Q8IWK6 1321 aa27.2■■□□□ 1.95
NME3-206ENST00000564252 FAM86B1E9PN63 330 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 CCNE2O96020 404 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 FAM86B2P0C5J1 330 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 SCG2P13521 617 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 CD52P31358 61 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 ZNF76P36508 570 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 FGD1P98174 961 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 TIGD5Q53EQ6 642 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 IER5Q5VY09 327 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 JAKMIP3Q5VZ66 844 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 Q6ZUG5 572 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 LINC01599Q8WXQ3 324 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 SNX14Q9Y5W7 946 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 SQORQ9Y6N5 450 aa27.2■■□□□ 1.94
NME3-206ENST00000564252 IGLV3-22A0A075B6J6 115 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 CCDC196A0A1B0GTZ2 297 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 POTEB3A0JP26 581 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 ADAMTS3O15072 1205 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 KCNA5P22460 613 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 SLC26A2P50443 739 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 TMEM62Q0P6H9 643 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 LEXMQ3ZCV2 418 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 POTEBQ6S5H4 581 aa27.19■■□□□ 1.94
NME3-206ENST00000564252 ABHD15Q6UXT9 468 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms