RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 GBP2P32456 591 aaPredicted RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 ITGB3BPQ13352 177 aaPredicted RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 SEPT2Q15019 361 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 NBPF12Q5TAG4 269 aaPredicted RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 LRIG3Q6UXM1 1119 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 TMEM179Q6ZVK1 233 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 DHX37Q8IY37 1157 aaKnown RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 CCHCR1Q8TD31 782 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 HDAC7Q8WUI4 952 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 CABP5Q9NP86 173 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 ZNHIT6Q9NWK9 470 aaKnown RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 RNF14Q9UBS8 474 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 BTBD18B2RXH4 712 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 E7EVH7 732 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 PAEPP09466 180 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 EEF1GP26641 437 aaKnown RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 EPHX2P34913 555 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 INHBEP58166 350 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 JAG1P78504 1218 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 NAA25Q14CX7 972 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 CDCA2Q69YH5 1023 aaPredicted RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 C8orf74Q6P047 294 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 RASSF8Q8NHQ8 419 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 WHAMMQ8TF30 809 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 FERMT2Q96AC1 680 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 CCDC43Q96MW1 224 aaKnown RBP12.15□□□□□ -0.46
TCF4-222ENST00000564228 SLC26A6Q9BXS9 759 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 OSBPL7Q9BZF2 842 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 LACRTQ9GZZ8 138 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 EBF2Q9HAK2 575 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 GMNCA6NCL1 334 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 RAD21O60216 631 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 TBC1D12O60347 775 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 USO1O60763 962 aaKnown RBP12.14□□□□□ -0.47
TCF4-222ENST00000564228 PLEKHA8P1O95397 391 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 KRT14P02533 472 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 PAFAH1B1P43034 410 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 AFMP43652 599 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 SCTRP47872 440 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 CCNHP51946 323 aaPredicted RBP12.14□□□□□ -0.47
TCF4-222ENST00000564228 RIPK1Q13546 671 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 EAPPQ56P03 285 aaPredicted RBP12.14□□□□□ -0.47
TCF4-222ENST00000564228 AP1ARQ63HQ0 302 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 KCTD16Q68DU8 428 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 EIF1ADQ8N9N8 165 aaKnown RBP12.14□□□□□ -0.47
TCF4-222ENST00000564228 ZNF507Q8TCN5 953 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 DCPSQ96C86 337 aaKnown RBP12.14□□□□□ -0.47
TCF4-222ENST00000564228 IQCDQ96DY2 449 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 SCLT1Q96NL6 688 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 KANSL2Q9H9L4 492 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 HAUS2Q9NVX0 235 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 RMND1Q9NWS8 449 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 PCDHB6Q9Y5E3 794 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
TCF4-222ENST00000564228 A0A087X0B3 334 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 DNM1LO00429 736 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 EEF2P13639 858 aaKnown RBP12.13□□□□□ -0.47
TCF4-222ENST00000564228 KIF5BP33176 963 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 GUCY1A2P33402 732 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 SEC24CP53992 1094 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 CCDC181Q5TID7 509 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 RRAGBQ5VZM2 374 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 USP49Q70CQ1 688 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 TATDN2Q93075 761 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
TCF4-222ENST00000564228 OSBPL9Q96SU4 736 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 TTYH3Q9C0H2 523 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.13□□□□□ -0.47
TCF4-222ENST00000564228 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 MYH10P35580 1976 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 PITPNM2Q9BZ72 1349 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 IQCA1LA6NCM1 817 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 UBE2Q2LH0YL09 131 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 LIN7AO14910 233 aaPredicted RBP12.13□□□□□ -0.47
TCF4-222ENST00000564228 TRAPPC3O43617 180 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 ATP6V1G2O95670 118 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 GSTA1P08263 222 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 NOVP48745 357 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 DNM2P50570 870 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 ZBED6P86452 979 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 SEMA3FQ13275 785 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 GRM4Q14833 912 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 ZNF658Q5TYW1 1059 aaPredicted RBP12.13□□□□□ -0.47
TCF4-222ENST00000564228 USP50Q70EL3 339 aaPredicted RBP12.13□□□□□ -0.47
TCF4-222ENST00000564228 SULF1Q8IWU6 871 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 TRIM22Q8IYM9 498 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 SMYD4Q8IYR2 804 aaPredicted RBP12.13□□□□□ -0.47
TCF4-222ENST00000564228 CACNA2D3Q8IZS8 1091 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 TCP11Q8WWU5 503 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 NELFBQ8WX92 580 aa12.13□□□□□ -0.47
TCF4-222ENST00000564228 ALS2CR12Q96Q35 445 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms