RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 KDM6AO15550 1401 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 COBLO75128 1261 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 RFPL3O75679 317 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 C6orf222P0C671 652 aaPredicted RBP7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 PLS3P13797 630 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 ENDOUP21128 410 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 GABREP78334 506 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 BNIP3Q12983 259 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 NTRK3Q16288 839 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 MSMPQ1L6U9 139 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 DENND5AQ6IQ26 1287 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 RCSD1Q6JBY9 416 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 NIM1KQ8IY84 436 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 NAT16Q8N8M0 369 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 KREMEN2Q8NCW0 462 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 FRS2Q8WU20 508 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 PTPRN2Q92932 1015 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 NINJ1Q92982 152 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 C1orf159Q96HA4 380 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 SPC25Q9HBM1 224 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 CLEC1BQ9P126 229 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 SFMBT1Q9UHJ3 866 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 ARFGEF1Q9Y6D6 1849 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 ADAMTS7Q9UKP4 1686 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 FLT4P35916 1363 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 TONSLQ96HA7 1378 aa7.82□□□□□ -1.16
HERPUD1-208ENST00000563911 POLRMTO00411 1230 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 FOXN1O15353 648 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 MEFVO15553 781 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 DNAJC6O75061 913 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 CD96P40200 585 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 TEKQ02763 1124 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 ZPBP2Q6X784 338 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 C16orf71Q8IYS4 520 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 STK11IPQ8N1F8 1099 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 SMC1BQ8NDV3 1235 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 NPLOC4Q8TAT6 608 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 DCAF4Q8WV16 495 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 IFT57Q9NWB7 429 aa7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 COL5A3P25940 1745 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-208ENST00000563911 NPHP3-ACAD11A0A0J9YXS1 232 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 TMEM82A0PJX8 343 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 GLTPD2A6NH11 291 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 IRS4O14654 1257 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 PAMP19021 973 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 RFC4P35249 363 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 MASP1P48740 699 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 IFNL2Q8IZJ0 200 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 SLC7A14Q8TBB6 771 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 MFSD3Q96ES6 412 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 PTCHD1Q96NR3 888 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 TMX1Q9H3N1 280 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 SLC52A2Q9HAB3 445 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 TMEFF2Q9UIK5 374 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 SLC5A6Q9Y289 635 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 TRAF6Q9Y4K3 522 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 PLEKHG2Q9H7P9 1386 aa7.8□□□□□ -1.16
HERPUD1-208ENST00000563911 WASHC2AQ641Q2 1341 aa7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 USP42Q9H9J4 1324 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 PPM1GO15355 546 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 FGF10O15520 208 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 EFCAB14O75071 495 aa7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 TBC1D8O95759 1140 aa7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 VEGFAP15692 232 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 CRKLP46109 303 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 TRIM61Q5EBN2 209 aa7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 ACBD5Q5T8D3 534 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 E4F1Q66K89 784 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 IQCEQ6IPM2 695 aa7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 KCNT2Q6UVM3 1135 aa7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 MAMDC2Q7Z304 686 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 BCL7CQ8WUZ0 217 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 DIO2Q92813 273 aa7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 POLKQ9UBT6 870 aa7.79□□□□□ -1.16
HERPUD1-208ENST00000563911 SMG6Q86US8 1419 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 TRBV23OR9-2A0A075B6M9 112 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 MYCLP1P12525 358 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 LTBRP36941 435 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 LAPTM5Q13571 262 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 EIF4A2Q14240 407 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 TM4SF20Q53R12 229 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 STYK1Q6J9G0 422 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 CPNE8Q86YQ8 564 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 MAGEB10Q96LZ2 347 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 PHF20Q9BVI0 1012 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 LMCD1Q9NZU5 365 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 CARMIL3Q8ND23 1372 aa7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 TNRC6CQ9HCJ0 1690 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-208ENST00000563911 ZNF831Q5JPB2 1677 aa7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 KIF24Q5T7B8 1368 aa7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 ERVV-2B6SEH9 535 aa7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 ARNTLO00327 626 aa7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 AQP7O14520 342 aa7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 APPP05067 770 aa7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 CD8BP10966 210 aa7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 SDSP20132 328 aa7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 IBSPP21815 317 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-208ENST00000563911 SSTR4P31391 388 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms