RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 GMCL1Q96IK5 515 aa8.76□□□□□ -1.01
TCF4-221ENST00000563888 TGS1Q96RS0 853 aaKnown RBP8.76□□□□□ -1.01
TCF4-221ENST00000563888 IRF2BPLQ9H1B7 796 aa8.76□□□□□ -1.01
TCF4-221ENST00000563888 ALDH8A1Q9H2A2 487 aaPredicted RBP8.76□□□□□ -1.01
TCF4-221ENST00000563888 MRS2Q9HD23 443 aa8.76□□□□□ -1.01
TCF4-221ENST00000563888 CLDND1Q9NY35 253 aa8.76□□□□□ -1.01
TCF4-221ENST00000563888 KCNMB2Q9Y691 235 aa8.76□□□□□ -1.01
TCF4-221ENST00000563888 ACACBO00763 2458 aa8.76□□□□□ -1.01
TCF4-221ENST00000563888 MYH13Q9UKX3 1938 aa8.76□□□□□ -1.01
TCF4-221ENST00000563888 FAM186AA6NE01 2351 aa8.76□□□□□ -1.01
TCF4-221ENST00000563888 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 PRR23AA6NEV1 266 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 EIF1AYO14602 144 aaKnown RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 DYNC1LI2O43237 492 aaPredicted RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 SNRPBP14678 240 aaKnown RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 SHMT1P34896 483 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 ERVK-21P61565 698 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 TNFAIP2Q03169 654 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 TFCP2Q12800 502 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 ORC1Q13415 861 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 ENOX2Q16206 610 aaKnown RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 DBN1Q16643 649 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 FSCN1Q16658 493 aaKnown RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 RIOX2Q8IUF8 465 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 ADSSL1Q8N142 457 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 MSL3Q8N5Y2 521 aaKnown RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 PPP1R13LQ8WUF5 828 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 PNMA5Q96PV4 448 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 POP1Q99575 1024 aaKnown RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 FSD1Q9BTV5 496 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 AP5M1Q9H0R1 490 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 DNAJC25Q9H1X3 360 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 ABHD16BQ9H3Z7 469 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 ALG13Q9NP73 1137 aaKnown RBP8.75□□□□□ -1.01
TCF4-221ENST00000563888 FBXO28Q9NVF7 368 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 ZNF236Q9UL36 1845 aa8.75□□□□□ -1.01
TCF4-221ENST00000563888 TECTAO75443 2155 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 LINC01553A4QN01 128 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 RBAK-RBAKDNI3L0D1 243 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 ZEB2O60315 1214 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 PHACTR2O75167 634 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 TNFRSF21O75509 655 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 WFS1O76024 890 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 SUPT20HL2P0C7V6 817 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 FAM157BP0CG42 384 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 AVPR2P30518 371 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 SFSWAPQ12872 951 aaKnown RBP8.74□□□□□ -1.01
TCF4-221ENST00000563888 CCINQ13939 588 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 TRIP4Q15650 581 aaPredicted RBP8.74□□□□□ -1.01
TCF4-221ENST00000563888 TCEAL5Q5H9L2 206 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 MAMDC4Q6UXC1 1216 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 DGLUCYQ7Z3D6 616 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 TTC6Q86TZ1 520 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 SNX29Q8TEQ0 813 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 PABPC5Q96DU9 382 aaKnown RBP8.74□□□□□ -1.01
TCF4-221ENST00000563888 RAD9AQ99638 391 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
TCF4-221ENST00000563888 C17orf80Q9BSJ5 609 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 AKAP2Q9Y2D5 859 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 ASTN1O14525 1302 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 TNKSO95271 1327 aa8.74□□□□□ -1.01
TCF4-221ENST00000563888 COL4A6Q14031 1691 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 PROB1E7EW31 1015 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 STXBP3O00186 592 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 VWA5AO00534 786 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 IQCF3P0C7M6 154 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 RFC2P35250 354 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 PLCD1P51178 756 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 WDR5P61964 334 aaKnown RBP8.73□□□□□ -1.01
TCF4-221ENST00000563888 DEFB103AP81534 67 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 ZXDAP98168 799 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 LAMC2Q13753 1193 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 PTPROQ16827 1216 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 FAM47CQ5HY64 1035 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 ARMCX2Q7L311 632 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 TLK2Q86UE8 772 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 CLEC10AQ8IUN9 316 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 CCDC144CPQ8IYA2 1237 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 MIGA1Q8NAN2 632 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 PMEPA1Q969W9 287 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 MRPL38Q96DV4 380 aaKnown RBP8.73□□□□□ -1.01
TCF4-221ENST00000563888 TRERF1Q96PN7 1200 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 ABI2Q9NYB9 513 aaPredicted RBP8.73□□□□□ -1.01
TCF4-221ENST00000563888 MARK1Q9P0L2 795 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 CTNNA3Q9UI47 895 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 IL16Q14005 1332 aa8.73□□□□□ -1.01
TCF4-221ENST00000563888 SASH3O75995 380 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 BAIAP3O94812 1187 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 POLR3DP05423 398 aaPredicted RBP8.72□□□□□ -1.01
TCF4-221ENST00000563888 MAPTP10636 758 aaKnown RBP8.72□□□□□ -1.01
TCF4-221ENST00000563888 MCAMP43121 646 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 TNP2Q05952 138 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 PSMD2Q13200 908 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 SMAD2Q15796 467 aaKnown RBP8.72□□□□□ -1.01
TCF4-221ENST00000563888 SNRNP48Q6IEG0 339 aaKnown RBP8.72□□□□□ -1.01
TCF4-221ENST00000563888 KRT25Q7Z3Z0 450 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 FRMD5Q7Z6J6 570 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 ANKRD35Q8N283 1001 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms