RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 LARP6Q9BRS8 491 aaKnown RBP20.14■□□□□ 0.81
NME3-205ENST00000563854 AGXT2Q9BYV1 514 aa20.14■□□□□ 0.81
NME3-205ENST00000563854 THEGQ9P2T0 379 aa20.14■□□□□ 0.81
NME3-205ENST00000563854 CYP46A1Q9Y6A2 500 aa20.14■□□□□ 0.81
NME3-205ENST00000563854 COL4A4P53420 1690 aaPredicted RBP20.13■□□□□ 0.81
NME3-205ENST00000563854 ESYT2A0FGR8 921 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 GHRP10912 638 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 PDIA3P30101 505 aaKnown RBP20.13■□□□□ 0.81
NME3-205ENST00000563854 KRT40Q6A162 431 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 TAF2Q6P1X5 1199 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 RSPH3Q86UC2 560 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 RASGRP4Q8TDF6 673 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 DNAJB3Q8WWF6 145 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 UPF3BQ9BZI7 483 aaKnown RBP20.13■□□□□ 0.81
NME3-205ENST00000563854 ZMYND12Q9H0C1 365 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 FAM49AQ9H0Q0 323 aaPredicted RBP20.13■□□□□ 0.81
NME3-205ENST00000563854 VPS54Q9P1Q0 977 aa20.13■□□□□ 0.81
NME3-205ENST00000563854 MICAL3Q7RTP6 2002 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 FAM86B1E9PN63 330 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 MEIS1O00470 390 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 BACH1O14867 736 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 UPP2O95045 317 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 FAM86B2P0C5J1 330 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 INSRRP14616 1297 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 TOB2Q14106 344 aaPredicted RBP20.12■□□□□ 0.81
NME3-205ENST00000563854 FBXL16Q8N461 479 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 GDPD5Q8WTR4 605 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 RNF26Q9BY78 433 aaPredicted RBP20.12■□□□□ 0.81
NME3-205ENST00000563854 IFIH1Q9BYX4 1025 aaKnown RBP20.12■□□□□ 0.81
NME3-205ENST00000563854 ZSWIM6Q9HCJ5 1215 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 KAT6AQ92794 2004 aa20.12■□□□□ 0.81
NME3-205ENST00000563854 CHRNA1P02708 482 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 GNA11P29992 359 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 STAT5BP51692 787 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 STK3Q13188 491 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 GRB10Q13322 594 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 PLCB4Q15147 1175 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 NTRK3Q16288 839 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 FAM26DQ5JW98 314 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 NIPA1Q7RTP0 329 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 CCDC148Q8NFR7 591 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 TRAPPC12Q8WVT3 735 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 TSPYL2Q9H2G4 693 aaPredicted RBP20.11■□□□□ 0.81
NME3-205ENST00000563854 MTCH2Q9Y6C9 303 aa20.11■□□□□ 0.81
NME3-205ENST00000563854 VCANP13611 3396 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 LINC01553A4QN01 128 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 RRN3P2A6NIE6 340 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 CCNE2O96020 404 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 IFNAR1P17181 557 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 TJAP1Q5JTD0 557 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 MARCH8Q5T0T0 291 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 MCTP2Q6DN12 878 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 BICD2Q8TD16 824 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 APBB2Q92870 758 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 TGS1Q96RS0 853 aaKnown RBP20.1■□□□□ 0.81
NME3-205ENST00000563854 YME1L1Q96TA2 773 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 ZNF577Q9BSK1 485 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 PPP4R2Q9NY27 417 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 TCEAL9Q9UHQ7 104 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 INSL6Q9Y581 213 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 CDY2AQ9Y6F7 541 aa20.1■□□□□ 0.81
NME3-205ENST00000563854 IGLV3-22A0A075B6J6 115 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 POTEB3A0JP26 581 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 MBLAC1A4D2B0 266 aaPredicted RBP20.09■□□□□ 0.81
NME3-205ENST00000563854 IPO5O00410 1097 aaKnown RBP20.09■□□□□ 0.81
NME3-205ENST00000563854 CPLX1O14810 134 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 EPB41L2O43491 1005 aaKnown RBP20.09■□□□□ 0.81
NME3-205ENST00000563854 NLRP5P59047 1200 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 TMEM62Q0P6H9 643 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
NME3-205ENST00000563854 FAM160B1Q5W0V3 765 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 POTEBQ6S5H4 581 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 TRIM22Q8IYM9 498 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 TNPO1Q92973 898 aaKnown RBP20.09■□□□□ 0.81
NME3-205ENST00000563854 SIP14410 1827 aa20.09■□□□□ 0.81
NME3-205ENST00000563854 CYP3A4P08684 503 aa20.08■□□□□ 0.81
NME3-205ENST00000563854 MRPS6P82932 125 aaKnown RBP20.08■□□□□ 0.81
NME3-205ENST00000563854 SETQ01105 290 aaPredicted RBP20.08■□□□□ 0.81
NME3-205ENST00000563854 SSRP1Q08945 709 aaKnown RBP20.08■□□□□ 0.81
NME3-205ENST00000563854 MGAT3Q09327 533 aa20.08■□□□□ 0.81
NME3-205ENST00000563854 LPIN1Q14693 890 aa20.08■□□□□ 0.81
NME3-205ENST00000563854 PRR16Q569H4 304 aa20.08■□□□□ 0.81
NME3-205ENST00000563854 PLPPR4Q7Z2D5 763 aa20.08■□□□□ 0.81
NME3-205ENST00000563854 IL27Q8NEV9 243 aa20.08■□□□□ 0.81
NME3-205ENST00000563854 SYMPKQ92797 1274 aaKnown RBP20.08■□□□□ 0.81
NME3-205ENST00000563854 PDRG1Q9NUG6 133 aa20.08■□□□□ 0.81
NME3-205ENST00000563854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.07■□□□□ 0.8
NME3-205ENST00000563854 M0QZ92 97 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 EVCP57679 992 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 MIS18BP1Q6P0N0 1132 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 PDXDC2PQ6P474 469 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 TRMT1LQ7Z2T5 733 aaKnown RBP20.07■□□□□ 0.8
NME3-205ENST00000563854 RPAINQ86UA6 219 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 CCDC60Q8IWA6 550 aaPredicted RBP20.07■□□□□ 0.8
NME3-205ENST00000563854 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 ATXN2LQ8WWM7 1075 aaKnown RBP20.07■□□□□ 0.8
NME3-205ENST00000563854 CRYGNQ8WXF5 182 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 C17orf80Q9BSJ5 609 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 ZNF302Q9NR11 478 aa20.07■□□□□ 0.8
NME3-205ENST00000563854 TRANK1O15050 2925 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms