RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 BAZ2AQ9UIF9 1905 aaKnown RBP12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 FAM221BA6H8Z2 402 aa12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 F5H6K3 240 aa12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 ZBED4O75132 1171 aa12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 CEACAM1P13688 526 aa12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 KLHL5Q96PQ7 755 aa12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 SLC2A4RGQ9NR83 387 aa12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 CACNA1DQ01668 2161 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 HIDE1A8MVS5 230 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 LILRB3O75022 631 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 FGF18O76093 207 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 CALD1Q05682 793 aaKnown RBP12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 SH3PXD2AQ5TCZ1 1133 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 KIAA1211LQ6NV74 962 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 COPS5Q92905 334 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 NXPE3Q969Y0 559 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 GOPCQ9HD26 462 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 MTF2Q9Y483 593 aaPredicted RBP12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 PCDHB12Q9Y5F1 795 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 PCNX1Q96RV3 2341 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 NAV3Q8IVL0 2385 aa12.91□□□□□ -0.34
HDGFL3-204ENST00000563790 ATG2BQ96BY7 2078 aa12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 CIAO1O76071 339 aa12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 PI4KAP42356 2102 aa12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 C12orf76Q8N812 135 aaPredicted RBP12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 CLDN23Q96B33 292 aa12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 NGRNQ9NPE2 291 aaKnown RBP12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 LZTS1Q9Y250 596 aa12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 EML5Q05BV3 1969 aa12.9□□□□□ -0.34
HDGFL3-204ENST00000563790 PTPRBP23467 1997 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 ENPP3O14638 875 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 CAND2O75155 1236 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 USP5P45974 858 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 DYNLL1P63167 89 aaKnown RBP12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 PDE4BQ07343 736 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 HIC1Q14526 733 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 RNF43Q68DV7 783 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 KANK3Q6NY19 840 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 LRRC47Q8N1G4 583 aaKnown RBP12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 TCF25Q9BQ70 676 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 SRCIN1Q9C0H9 1055 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 DZANK1Q9NVP4 752 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 TMEM260Q9NX78 707 aa12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
HDGFL3-204ENST00000563790 LOC102724159A0A0B4J2E5 919 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 FAM170BA6NMN3 283 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 HAS3O00219 553 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 CSRP1P21291 193 aaKnown RBP12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 RPS9P46781 194 aaKnown RBP12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 PSEN2P49810 448 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 TIMM10P62072 90 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 SCAPQ12770 1279 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 UBXN2BQ14CS0 331 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 PWP2Q15269 919 aaKnown RBP12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 KATNAL1Q9BW62 490 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 ENTPD7Q9NQZ7 604 aa12.88□□□□□ -0.35
HDGFL3-204ENST00000563790 CAPN8A6NHC0 703 aa12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 N4BP1O75113 896 aaKnown RBP12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 EEF2P13639 858 aaKnown RBP12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 FEZF2Q8TBJ5 459 aa12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 XAGE2Q96GT9 111 aa12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 MYADMQ96S97 322 aa12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 RNF146Q9NTX7 359 aa12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 CYP39A1Q9NYL5 469 aa12.87□□□□□ -0.35
HDGFL3-204ENST00000563790 MTCL1Q9Y4B5 1905 aaKnown RBP12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 HRO43593 1189 aa12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 CTSHP09668 335 aa12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 MFSD10Q14728 455 aa12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 KIAA0753Q2KHM9 967 aa12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 GPR149Q86SP6 731 aa12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 EPS15L1Q9UBC2 864 aa12.86□□□□□ -0.35
HDGFL3-204ENST00000563790 BOD1L1Q8NFC6 3051 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 CLASP2O75122 1294 aaKnown RBP12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 WISP1O95388 367 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 F2P00734 622 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 TXNP10599 105 aaKnown RBP12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 AKR1B1P15121 316 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 CNR2P34972 360 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 PRKCQQ04759 706 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 MTAPQ13126 283 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 LETM2Q2VYF4 491 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms