RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 RIT2Q99578 217 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 PDLIM7Q9NR12 457 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 MYH15Q9Y2K3 1946 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 FOXD4L6Q3SYB3 417 aaPredicted RBP16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 FOXD4L3Q6VB84 417 aaPredicted RBP16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 SH3RF1Q7Z6J0 888 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 SEPT1Q8WYJ6 367 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 TMEM60Q9H2L4 133 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 TBC1D22BQ9NU19 505 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 KAT6AQ92794 2004 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 DDX39AO00148 427 aaKnown RBP16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 NOP56O00567 594 aaKnown RBP16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 B4GALT4O60513 344 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 PSEN2P49810 448 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 MFSD10Q14728 455 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 ATL3Q6DD88 541 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 CCDC60Q8IWA6 550 aaPredicted RBP16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 C7orf61Q8IZ16 206 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 TBX21Q9UL17 535 aa16.64■□□□□ 0.25
SCAMP2-203ENST00000563663 H3BRB1 525 aa16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 PQBP1O60828 265 aaKnown RBP16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 ITGB8P26012 769 aa16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 ZNF746Q6NUN9 644 aaPredicted RBP16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 C4orf32Q8N8J7 132 aa16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 UNC45AQ9H3U1 944 aa16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 TUT1Q9H6E5 874 aaKnown RBP16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 ATP11BQ9Y2G3 1177 aa16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 TANC1Q9C0D5 1861 aa16.63■□□□□ 0.25
SCAMP2-203ENST00000563663 TRIM43BA6NCK2 446 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 TBX3O15119 743 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 EVI5O60447 810 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 ATP4AP20648 1035 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 ADAM17P78536 824 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 LRCH2Q5VUJ6 765 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 ZSCAN30Q86W11 494 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 TRIM43Q96BQ3 446 aaPredicted RBP16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 TRPV6Q9H1D0 765 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 TRMT13Q9NUP7 481 aaKnown RBP16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 GTF2IRD1Q9UHL9 959 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 IGSF9BQ9UPX0 1349 aa16.62■□□□□ 0.25
SCAMP2-203ENST00000563663 KRT76Q01546 638 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 PPP2R5CQ13362 524 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 AFAP1L1Q8TED9 768 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 DPF3Q92784 378 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 FAM20AQ96MK3 541 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 SEZ6LQ9BYH1 1024 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 H0YGN5 161 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 EML1O00423 815 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 PTPN11Q06124 597 aaPredicted RBP16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 SMAP1Q8IYB5 467 aaPredicted RBP16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 KATNAL1Q9BW62 490 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 PCDHB6Q9Y5E3 794 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 SIP14410 1827 aa16.61■□□□□ 0.25
SCAMP2-203ENST00000563663 MROH7Q68CQ1 1323 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 KIAA0355O15063 1070 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 NEMFO60524 1076 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 GAS7O60861 476 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 CLTBP09497 229 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 RESTQ13127 1097 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 UGCGQ16739 394 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 TTC38Q5R3I4 469 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 WNT8BQ93098 351 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 VTI1AQ96AJ9 217 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 MAFBQ9Y5Q3 323 aaPredicted RBP16.6■□□□□ 0.25
SCAMP2-203ENST00000563663 SCN5AQ14524 2016 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 H3BQV1 296 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 ZNF862O60290 1169 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 SMIM10L2AP0DMW4 78 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 SMIM10L2BP0DMW5 78 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 MCM7P33993 719 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 ZNF200P98182 395 aaPredicted RBP16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 ORC2Q13416 577 aaPredicted RBP16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 PLPPR4Q7Z2D5 763 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 TET1Q8NFU7 2136 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 DHX38Q92620 1227 aaKnown RBP16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 TEKT3Q9BXF9 490 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 ZMYND8Q9ULU4 1186 aaPredicted RBP16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 SZT2Q5T011 3432 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 WDR64B1ANS9 1081 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 ZBTB42B2RXF5 422 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 RBAK-RBAKDNI3L0D1 243 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 STBD1O95210 358 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 SYN1P17600 705 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 MARK3P27448 753 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 ZNF174Q15697 407 aa16.59■□□□□ 0.25
SCAMP2-203ENST00000563663 VWCEQ96DN2 955 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms